RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 SYT13Q7L8C5 426 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 CAMKK1Q8N5S9 505 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 RNF139Q8WU17 664 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 TUBGCP2Q9BSJ2 902 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 NDST4Q9H3R1 872 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 ARHGEF4Q9NR80 690 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 ABCC13Q9NSE7 274 aa24.1■■□□□ 1.45
PTPN4-208ENST00000460289 RIF1Q5UIP0 2472 aaKnown RBP24.1■■□□□ 1.45
PTPN4-208ENST00000460289 RGS7P49802 495 aa24.09■■□□□ 1.45
PTPN4-208ENST00000460289 VWA3BQ502W6 1294 aa24.09■■□□□ 1.45
PTPN4-208ENST00000460289 BSPRYQ5W0U4 402 aa24.09■■□□□ 1.45
PTPN4-208ENST00000460289 Q6ZNB5 142 aa24.09■■□□□ 1.45
PTPN4-208ENST00000460289 RBM43Q6ZSC3 357 aaKnown RBP24.09■■□□□ 1.45
PTPN4-208ENST00000460289 IRGQQ8WZA9 623 aa24.09■■□□□ 1.45
PTPN4-208ENST00000460289 NDRG1Q92597 394 aaKnown RBP24.09■■□□□ 1.45
PTPN4-208ENST00000460289 RUBCNQ92622 972 aa24.09■■□□□ 1.45
PTPN4-208ENST00000460289 XPO6Q96QU8 1125 aaKnown RBP24.09■■□□□ 1.45
PTPN4-208ENST00000460289 DEC1Q9P2X7 70 aa24.09■■□□□ 1.45
PTPN4-208ENST00000460289 PTPRZ1P23471 2315 aaPredicted RBP24.09■■□□□ 1.45
PTPN4-208ENST00000460289 CCDC163A0A0D9SF12 145 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 YJEFN3A6XGL0 299 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 E7ENQ6 273 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 CALCAP01258 141 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 CHKAP35790 457 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 TNFRSF4P43489 277 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 DAOAP59103 153 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 MRPS21P82921 87 aaKnown RBP24.08■■□□□ 1.45
PTPN4-208ENST00000460289 DMWDQ09019 674 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 MEA1Q16626 185 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 ARHGAP44Q17R89 818 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 HEATR6Q6AI08 1181 aaKnown RBP24.08■■□□□ 1.45
PTPN4-208ENST00000460289 GJB7Q6PEY0 223 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 BHLHA9Q7RTU4 235 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 WDR5BQ86VZ2 330 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 C12orf40Q86WS4 652 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 ETFBKMTQ8IXQ9 262 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 NAT16Q8N8M0 369 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 ENOX1Q8TC92 643 aaKnown RBP24.08■■□□□ 1.45
PTPN4-208ENST00000460289 USP33Q8TEY7 942 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 BBS2Q9BXC9 721 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 MARK1Q9P0L2 795 aa24.08■■□□□ 1.45
PTPN4-208ENST00000460289 SLC12A8A0AV02 714 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 KCNJ18B7U540 433 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 TULP3O75386 442 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 FBXO21O94952 628 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 LETM1O95202 739 aaPredicted RBP24.07■■□□□ 1.44
PTPN4-208ENST00000460289 MBD3O95983 291 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 EEF1GP26641 437 aaKnown RBP24.07■■□□□ 1.44
PTPN4-208ENST00000460289 USP8P40818 1118 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 SEC13P55735 322 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 KCNJ12Q14500 433 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 C2orf27AQ580R0 203 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 HSP90AA4PQ58FG1 418 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 ZNF606Q8WXB4 792 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 GOLGA1Q92805 767 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 HINFPQ9BQA5 517 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 SAMSN1Q9NSI8 373 aaKnown RBP24.07■■□□□ 1.44
PTPN4-208ENST00000460289 RAB23Q9ULC3 237 aa24.07■■□□□ 1.44
PTPN4-208ENST00000460289 TBC1D3BA6NDS4 549 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 HMBSP08397 361 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 GNA15P30679 374 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 GPD2P43304 727 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 KDSRQ06136 332 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 DMC1Q14565 340 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 MIIPQ5JXC2 388 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 SASS6Q6UVJ0 657 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 TPGS1Q6ZTW0 290 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 STK32AQ8WU08 396 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 EDEM1Q92611 657 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 PLD4Q96BZ4 506 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 SMG5Q9UPR3 1016 aaKnown RBP24.06■■□□□ 1.44
PTPN4-208ENST00000460289 NFE2L3Q9Y4A8 694 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 FAM186AA6NE01 2351 aa24.06■■□□□ 1.44
PTPN4-208ENST00000460289 NEDD8-MDP1E9PL57 170 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 THAP12O43422 761 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 HRO43593 1189 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 GABBR2O75899 941 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 KLKB1P03952 638 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 TYRP14679 529 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 CORO1AP31146 461 aaKnown RBP24.05■■□□□ 1.44
PTPN4-208ENST00000460289 ACADSBP45954 432 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 APBA1Q02410 837 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 HSF5Q4G112 596 aaPredicted RBP24.05■■□□□ 1.44
PTPN4-208ENST00000460289 TCP11X2Q5H9J9 407 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 FMNL3Q8IVF7 1028 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 PHTF2Q8N3S3 785 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 KCNV2Q8TDN2 545 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 SHC3Q92529 594 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 ST7Q9NRC1 585 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 NCDNQ9UBB6 729 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 DNAJC12Q9UKB3 198 aa24.05■■□□□ 1.44
PTPN4-208ENST00000460289 HBS1LQ9Y450 684 aaKnown RBP24.05■■□□□ 1.44
PTPN4-208ENST00000460289 ATG2BQ96BY7 2078 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 MYOFQ9NZM1 2061 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 BECN2A8MW95 431 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 PIK3R2O00459 728 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 PES1O00541 588 aaKnown RBP24.04■■□□□ 1.44
PTPN4-208ENST00000460289 SART1O43290 800 aaKnown RBP24.04■■□□□ 1.44
PTPN4-208ENST00000460289 CACNG3O60359 315 aa24.04■■□□□ 1.44
PTPN4-208ENST00000460289 RPL34P49207 117 aaKnown RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms