RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 PLEKHH3Q7Z736 793 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 SIX6OS1Q8N1H7 587 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 RMDN2Q96LZ7 410 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 ADAM7Q9H2U9 754 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 STOML1Q9UBI4 398 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 HAO1Q9UJM8 370 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 TCRBV7S3A2A0A539 114 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 TSPAN1O60635 241 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 ENTPD5O75356 428 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 UNC5CO95185 931 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 TARSP26639 723 aaKnown RBP15.98■□□□□ 0.15
LMNB1-203ENST00000460265 RPA3P35244 121 aaPredicted RBP15.98■□□□□ 0.15
LMNB1-203ENST00000460265 MPP2Q14168 576 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 TAF1CQ15572 869 aaPredicted RBP15.98■□□□□ 0.15
LMNB1-203ENST00000460265 PPFIBP2Q8ND30 876 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 PHC3Q8NDX5 983 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 TTC8Q8TAM2 541 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 TMEM174Q8WUU8 243 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 FERMT1Q9BQL6 677 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 DPEP3Q9H4B8 488 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 CCDC195A0A1B0GUA6 201 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 IQCA1LA6NCM1 817 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 TRUB2O95900 331 aaKnown RBP15.98■□□□□ 0.15
LMNB1-203ENST00000460265 FAM200BP0CF97 657 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 YBX3P16989 372 aaKnown RBP eCLIP15.98■□□□□ 0.153e-9■□□□□ 10.7
LMNB1-203ENST00000460265 GJA5P36382 358 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 HUNKP57058 714 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 SPDYCQ5MJ68 293 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 USP50Q70EL3 339 aaPredicted RBP15.98■□□□□ 0.15
LMNB1-203ENST00000460265 ZNF354CQ86Y25 554 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.98■□□□□ 0.15
LMNB1-203ENST00000460265 APPL2Q8NEU8 664 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 SLC2A14Q8TDB8 520 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 CLEC4CQ8WTT0 213 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 PAFAH2Q99487 392 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 KLC2Q9H0B6 622 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 ABHD16BQ9H3Z7 469 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 RMI1Q9H9A7 625 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 NPHS2Q9NP85 383 aa15.98■□□□□ 0.15
LMNB1-203ENST00000460265 PSMC3IPQ9P2W1 217 aaPredicted RBP15.98■□□□□ 0.15
LMNB1-203ENST00000460265 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 KITP10721 976 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 GPD2P43304 727 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 FNBP1LQ5T0N5 605 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 OR52E8Q6IFG1 317 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 TTC16Q8NEE8 873 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 MAGEB5Q9BZ81 275 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 CYP3A43Q9HB55 503 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 VTA1Q9NP79 307 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 ZC3H7BQ9UGR2 993 aaKnown RBP15.97■□□□□ 0.15
LMNB1-203ENST00000460265 UBTFL6P0CB48 400 aaPredicted RBP15.97■□□□□ 0.15
LMNB1-203ENST00000460265 ZCCHC18P0CG32 403 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 ERFP50548 548 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 GTF2A2P52657 109 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 GEMIN4P57678 1058 aaKnown RBP15.97■□□□□ 0.15
LMNB1-203ENST00000460265 DPYSL3Q14195 570 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 DSTYKQ6XUX3 929 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 ASRGL1Q7L266 308 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 LCA5Q86VQ0 697 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 ATXN7L3BQ96GX2 97 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 DDX50Q9BQ39 737 aaKnown RBP15.97■□□□□ 0.15
LMNB1-203ENST00000460265 LRCH1Q9Y2L9 728 aa15.97■□□□□ 0.15
LMNB1-203ENST00000460265 ZNF132P52740 706 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 LRRC38Q5VT99 294 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 HEATR6Q6AI08 1181 aaKnown RBP15.96■□□□□ 0.15
LMNB1-203ENST00000460265 FAM13CQ8NE31 585 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 ERP27Q96DN0 273 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 GBA2Q9HCG7 927 aaPredicted RBP15.96■□□□□ 0.15
LMNB1-203ENST00000460265 ITGA11Q9UKX5 1188 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 PCDHGC3Q9UN70 934 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 CLDN5O00501 218 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 LPXNO60711 386 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 LMO2P25791 158 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 ATICP31939 592 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 MAGEA10P43363 369 aaPredicted RBP15.96■□□□□ 0.15
LMNB1-203ENST00000460265 PTK7Q13308 1070 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 FBXO47Q5MNV8 452 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 SLC27A1Q6PCB7 646 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 AGGF1Q8N302 714 aaeCLIP15.96■□□□□ 0.15
LMNB1-203ENST00000460265 PPTC7Q8NI37 304 aa15.96■□□□□ 0.15
LMNB1-203ENST00000460265 AMPD1P23109 780 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 ZNF143P52747 638 aaPredicted RBP15.96■□□□□ 0.14
LMNB1-203ENST00000460265 BOLA3Q53S33 107 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 GNASQ5JWF2 1037 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 VSTM1Q6UX27 236 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 BBS12Q6ZW61 710 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 HASPINQ8TF76 798 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 CPT1BQ92523 772 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 CYTH2Q99418 400 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 RNF39Q9H2S5 420 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 NMRK1Q9NWW6 199 aa15.96■□□□□ 0.14
LMNB1-203ENST00000460265 CITO14578 2027 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 IGKV6-21A0A0C4DH24 114 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 KBTBD13C9JR72 458 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 APOC4-APOC2K7ER74 178 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 STRNO43815 780 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 APOC2P02655 101 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 KLRC2P26717 231 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 VHLP40337 213 aa15.95■□□□□ 0.14
LMNB1-203ENST00000460265 BMPR2Q13873 1038 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms