RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 TANC1Q9C0D5 1861 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 ELAC1Q9H777 363 aaKnown RBP10.81□□□□□ -0.68
HERC4-207ENST00000460168 TBC1D13Q9NVG8 400 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 SCN5AQ14524 2016 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 GOLGA6L10A0A0M3HER8 536 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 DDHD2O94830 711 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 TMCC1O94876 653 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 SEC31AO94979 1220 aaKnown RBP10.81□□□□□ -0.68
HERC4-207ENST00000460168 ITGB1P05556 798 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 COL6A1P12109 1028 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 PSMA2P25787 234 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 PCSK1P29120 753 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 MAN1A1P33908 653 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 CLUL1Q15846 466 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 CCDC142Q17RM4 750 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 MDH1BQ5I0G3 518 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 C1orf53Q5VUE5 145 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 KAZNQ674X7 775 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 C8orf74Q6P047 294 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 DCLRE1AQ6PJP8 1040 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 RHOT1Q8IXI2 618 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 MMGT1Q8N4V1 131 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 EMC1Q8N766 993 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 ARMC5Q96C12 935 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 ERP27Q96DN0 273 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 SYT15Q9BQS2 421 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 MED10Q9BTT4 135 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 UBE2OQ9C0C9 1292 aaKnown RBP10.81□□□□□ -0.68
HERC4-207ENST00000460168 ARFGAP3Q9NP61 516 aa10.81□□□□□ -0.68
HERC4-207ENST00000460168 TTC7AQ9ULT0 858 aaPredicted RBP10.81□□□□□ -0.68
HERC4-207ENST00000460168 ARHGEF37A1IGU5 675 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 F8VP50 259 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 F8W810 466 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 NDUFAB1O14561 156 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 PSTPIP1O43586 416 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 PYGMP11217 842 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 TKTP29401 623 aaKnown RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 OR1G1P47890 313 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 OGDHQ02218 1023 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 DSC1Q08554 894 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 ZNF252P-AS1Q0IIN9 211 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 MUM1Q2TAK8 710 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 AADACL2Q6P093 401 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 FAM183BPQ6ZVS7 135 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 ADAT2Q7Z6V5 191 aaKnown RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 CEP57Q86XR8 500 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 SCUBE3Q8IX30 993 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 FUKQ8N0W3 1084 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 LILRB2Q8N423 598 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 JOSD2Q8TAC2 188 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 ACMSDQ8TDX5 336 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 STK32AQ8WU08 396 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 MCRS1Q96EZ8 462 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 NAF1Q96HR8 494 aaKnown RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 KRT12Q99456 494 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 HNRNPABQ99729 332 aaKnown RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 SLC4A5Q9BY07 1137 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 TMEM39AQ9NV64 488 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 DSEQ9UL01 958 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 PRG3Q9Y2Y8 225 aaPredicted RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 KIAA0100Q14667 2235 aaKnown RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 CLDN5O00501 218 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 B4GALT3O60512 393 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 TAS2R40P59535 323 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 BEND6Q5SZJ8 279 aaPredicted RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 KIAA0319Q5VV43 1072 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 C11orf74Q86VG3 221 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 KLHL7Q8IXQ5 586 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 ANKLE1Q8NAG6 615 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 FNIP1Q8TF40 1166 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 PAWRQ96IZ0 340 aaKnown RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 SUSD3Q96L08 255 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 PNKPQ96T60 521 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 LRRC1Q9BTT6 524 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 CRTAC1Q9NQ79 661 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 SEPT10Q9P0V9 454 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 CIDEBQ9UHD4 219 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 CDH9Q9ULB4 789 aa10.8□□□□□ -0.68
HERC4-207ENST00000460168 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.8□□□□□ -0.68
HERC4-207ENST00000460168 CCDC188H7C350 402 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 M0QZQ0 153 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 HOXA2O43364 376 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 MGRN1O60291 552 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 FOXD2O60548 495 aaPredicted RBP10.79□□□□□ -0.68
HERC4-207ENST00000460168 GRAP2O75791 330 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 CXCL10P02778 98 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 CLTBP09497 229 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 LCP1P13796 627 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 NPR3P17342 541 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 ACTN3Q08043 901 aaPredicted RBP10.79□□□□□ -0.68
HERC4-207ENST00000460168 ODF2Q5BJF6 829 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 OVOS1Q6IE37 1185 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 C14orf80Q86SX3 495 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 COLGALT2Q8IYK4 626 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 NIPA2Q8N8Q9 360 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 SPATA18Q8TC71 538 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 PCED1BQ96HM7 432 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 PIWIL1Q96J94 861 aaKnown RBP10.79□□□□□ -0.68
HERC4-207ENST00000460168 DUSP16Q9BY84 665 aa10.79□□□□□ -0.68
HERC4-207ENST00000460168 B3GNT5Q9BYG0 378 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms