RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 COCHO43405 550 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 CILPO75339 1184 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 DKK1O94907 266 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 PDGFRBP09619 1106 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 PLA2G2AP14555 144 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 NOP14P78316 857 aaKnown RBP11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 BNC1Q01954 994 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 KCNA1Q09470 495 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 NFKBIBQ15653 356 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 ANO4Q32M45 955 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 WDR45BQ5MNZ6 344 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 KIAA1324Q6UXG2 1013 aaKnown RBP11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 EPM2AIP1Q7L775 607 aaPredicted RBP11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 EFCAB3Q8N7B9 438 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 FOXJ1Q92949 421 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 WBP2Q969T9 261 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 PCED1BQ96HM7 432 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 CEP295NLQ96MC4 621 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 GABRG3Q99928 467 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 PANK2Q9BZ23 570 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 MTMR12Q9C0I1 747 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 GAREM1Q9H706 876 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 SPHK2Q9NRA0 654 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 TM7SF3Q9NS93 570 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 ITGA11Q9UKX5 1188 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 CDH9Q9ULB4 789 aa11.96□□□□□ -0.49
PRAMEF35P-201ENST00000458709 PRRT4C9JH25 899 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 TRIM66O15016 1216 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 EIF3DO15371 548 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ITPKBP27987 946 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CD6P30203 668 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 PPP3CCP48454 512 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 RBP5P82980 135 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CUL4BQ13620 913 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MDH1BQ5I0G3 518 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 GRAMD4Q6IC98 578 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ZNF720Q7Z2F6 126 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 LIMS2Q7Z4I7 341 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 SFR1Q86XK3 245 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 TMEM25Q86YD3 366 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CCDC65Q8IXS2 484 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 DNASE2BQ8WZ79 361 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 OTUB2Q96DC9 234 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 SLITRK1Q96PX8 696 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MIR1-1HGQ9H1L0 117 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 DNAJC17Q9NVM6 304 aaKnown RBP11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 WDR70Q9NW82 654 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 RMND1Q9NWS8 449 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 RBAKQ9NYW8 714 aaPredicted RBP11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 EHD2Q9NZN4 543 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 KIAA1468Q9P260 1216 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 BTBD3Q9Y2F9 522 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 SH3BP1Q9Y3L3 701 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 STARD13Q9Y3M8 1113 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 NME7Q9Y5B8 376 aa11.95□□□□□ -0.5
PRAMEF35P-201ENST00000458709 GOLGA8IPA6NC78 632 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 GOLGA8JA6NMD2 632 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 WASH3PC4AMC7 463 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ATXN7O15265 892 aaPredicted RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 FLRT2O43155 660 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 KALRNO60229 2985 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 SMC2O95347 1197 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CER1O95813 267 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 RPN1P04843 607 aaKnown RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 TMEM191BP0C7N4 346 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ZNF883P0CG24 379 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 NCAM1P13591 858 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MATKP42679 507 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 SNRPFP62306 86 aaKnown RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MAPRE1Q15691 268 aaKnown RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 HLA-BQ31612 363 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 PREPLQ4J6C6 727 aaPredicted RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CT47A1Q5JQC4 288 aaPredicted RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CCDC183Q5T5S1 534 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 TDRD10Q5VZ19 366 aaKnown RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 NUDT18Q6ZVK8 323 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 GALNT15Q8N3T1 639 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MYCBPAPQ8TBZ2 947 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 RHBDD1Q8TEB9 315 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CACTINQ8WUQ7 758 aaKnown RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 TOE1Q96GM8 510 aaKnown RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 C8orf48Q96LL4 319 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 GPR174Q9BXC1 333 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ZNF518BQ9C0D4 1074 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 NUP62CLQ9H1M0 184 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 PDE11AQ9HCR9 933 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 WSB2Q9NYS7 404 aaPredicted RBP11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 PCDHA5Q9Y5H7 936 aa11.94□□□□□ -0.5
PRAMEF35P-201ENST00000458709 PTPRJQ12913 1337 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 NEDD8-MDP1E9PL57 170 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 TK2O00142 265 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 IRF1P10914 325 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 WARSP23381 471 aaKnown RBP11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 PPP1R2P41236 205 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MCCD1P59942 119 aaPredicted RBP11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 ASIC1P78348 528 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 MORC3Q14149 939 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 CCDC157Q569K6 752 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 DCAF12L1Q5VU92 463 aa11.93□□□□□ -0.5
PRAMEF35P-201ENST00000458709 SDE2Q6IQ49 451 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms