RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 GJC1P36383 396 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 MARCKSL1P49006 195 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 SLC11A1P49279 550 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 FNTAP49354 379 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 MAP3K7CLP57077 242 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 RNASE9P60153 205 aaKnown RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 LMNB2Q03252 620 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 DLX2Q07687 328 aaPredicted RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 ZNF252P-AS1Q0IIN9 211 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 ZNF211Q13398 564 aaPredicted RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 CBX2Q14781 532 aaPredicted RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 CTXN3Q4LDR2 81 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 SPOUT1Q5T280 376 aaKnown RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 FAM171A1Q5VUB5 890 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 FUT10Q6P4F1 479 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 TMCO3Q6UWJ1 677 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 VSTM1Q6UX27 236 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 CD300LGQ6UXG3 332 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 TRIM67Q6ZTA4 783 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 VSIG1Q86XK7 387 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 MAP7D3Q8IWC1 876 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 IFT20Q8IY31 132 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 CMTR2Q8IYT2 770 aaKnown RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 CRIPAKQ8N1N5 446 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 JOSD2Q8TAC2 188 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 TEKT4Q8WW24 435 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 RXFP2Q8WXD0 754 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS50-207ENST00000458530 TOP1MTQ969P6 601 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 FAM149B1Q96BN6 582 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 ZNF558Q96NG5 402 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 KRT12Q99456 494 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 FRMD8P1Q9BZ68 369 aaPredicted RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 ZCWPW1Q9H0M4 648 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 CSNK1G1Q9HCP0 422 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 AAASQ9NRG9 546 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS50-207ENST00000458530 EHD2Q9NZN4 543 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 STIM2Q9P246 746 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 TJP2Q9UDY2 1190 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 FEZ2Q9UHY8 353 aaPredicted RBP9.34□□□□□ -0.91
VPS50-207ENST00000458530 RAB21Q9UL25 225 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 EFR3BQ9Y2G0 817 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 PCDHB5Q9Y5E4 795 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 DCHS1Q96JQ0 3298 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 DMDP11532 3685 aa9.34□□□□□ -0.91
VPS50-207ENST00000458530 GREB1Q4ZG55 1949 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 LRRD1A4D1F6 860 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 FAM187AA6NFU0 413 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PROB1E7EW31 1015 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 F8VP50 259 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 TULP2O00295 520 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 NDC80O14777 642 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 FSCN2O14926 492 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 UPP2O95045 317 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 ITGB1P05556 798 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 GALTP07902 379 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PYGMP11217 842 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 TNFRSF8P28908 595 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 NOS2P35228 1153 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PPM1AP35813 382 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 MATKP42679 507 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 MAGEA11P43364 429 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 TKTL1P51854 596 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 AIF1P55008 147 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 BCAR1P56945 870 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 TAS2R40P59535 323 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 YWHAZP63104 245 aaKnown RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 OGDHQ02218 1023 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 SLC25A11Q02978 314 aaKnown RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 CREMQ03060 361 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 KCNC4Q03721 635 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 HYAL1Q12794 435 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 SMAD4Q13485 552 aaKnown RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 GPM6BQ13491 265 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PDK2Q15119 407 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 BOLA3Q53S33 107 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 TFDP3Q5H9I0 405 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 RAB41Q5JT25 222 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 KIAA0319Q5VV43 1072 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PAQR9Q6ZVX9 377 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 SYDE1Q6ZW31 735 aaPredicted RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 STRADAQ7RTN6 431 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PSTKQ8IV42 348 aaKnown RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 SCUBE3Q8IX30 993 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 KLHL7Q8IXQ5 586 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 ARHGAP18Q8N392 663 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 EMC1Q8N766 993 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 EIF1ADQ8N9N8 165 aaKnown RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 C12orf50Q8NA57 414 aaPredicted RBP9.33□□□□□ -0.92
VPS50-207ENST00000458530 OR10T2Q8NGX3 314 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 SPPL2BQ8TCT7 592 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 MSLNLQ96KJ4 702 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 CEP295NLQ96MC4 621 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 SLITRK1Q96PX8 696 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 PKMYT1Q99640 499 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 SMOQ99835 787 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 RTP3Q9BQQ7 232 aa9.33□□□□□ -0.92
VPS50-207ENST00000458530 TTPALQ9BTX7 342 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms