RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 STC2O76061 302 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 DRD1P21728 446 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 OPRD1P41143 372 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 COPB1P53618 953 aaKnown RBP19.57■□□□□ 0.72
USP39-209ENST00000458268 PTK2Q05397 1052 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 PPP2R5DQ14738 602 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 DRAP1Q14919 205 aaPredicted RBP19.57■□□□□ 0.72
USP39-209ENST00000458268 BSPRYQ5W0U4 402 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 PM20D1Q6GTS8 502 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 C12orf40Q86WS4 652 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 TMEM25Q86YD3 366 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 FMNL3Q8IVF7 1028 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 CNGB3Q9NQW8 809 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 SPHK2Q9NRA0 654 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 POLR3BQ9NW08 1133 aaPredicted RBP19.57■□□□□ 0.72
USP39-209ENST00000458268 C2orf42Q9NWW7 574 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 SFMBT1Q9UHJ3 866 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 CNTN6Q9UQ52 1028 aa19.57■□□□□ 0.72
USP39-209ENST00000458268 MSI1O43347 362 aaKnown RBP19.56■□□□□ 0.72
USP39-209ENST00000458268 GABBR2O75899 941 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 CORO1AP31146 461 aaKnown RBP19.56■□□□□ 0.72
USP39-209ENST00000458268 COG7P83436 770 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 GAD2Q05329 585 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 ZC3H14Q6PJT7 736 aaKnown RBP19.56■□□□□ 0.72
USP39-209ENST00000458268 HTR3DQ70Z44 454 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 BHLHA9Q7RTU4 235 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 DENND1CQ8IV53 801 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 SPEM1Q8N4L4 309 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 RPLP0P6Q8NHW5 317 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 OTUB2Q96DC9 234 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 BBS2Q9BXC9 721 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 NAT10Q9H0A0 1025 aaKnown RBP19.56■□□□□ 0.72
USP39-209ENST00000458268 PLCB1Q9NQ66 1216 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 ABCC13Q9NSE7 274 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 FAM207AQ9NSI2 230 aaPredicted RBP19.56■□□□□ 0.72
USP39-209ENST00000458268 OLA1Q9NTK5 396 aaKnown RBP19.56■□□□□ 0.72
USP39-209ENST00000458268 FBXO4Q9UKT5 387 aa19.56■□□□□ 0.72
USP39-209ENST00000458268 KIAA1549LQ6ZVL6 1849 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 LTFP02788 710 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 APODP05090 189 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 HOXC13P31276 330 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 KRT9P35527 623 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 GPD2P43304 727 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 GAB4Q2WGN9 574 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 C2orf27AQ580R0 203 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 KLHDC7AQ5VTJ3 777 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 TAF3Q5VWG9 929 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 KLHDC10Q6PID8 442 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 SLC47A2Q86VL8 602 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 SCUBE3Q8IX30 993 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 ATRIPQ8WXE1 791 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 NKD2Q969F2 451 aaPredicted RBP19.55■□□□□ 0.72
USP39-209ENST00000458268 HSFY1Q96LI6 401 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 PNKPQ96T60 521 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 IER2Q9BTL4 223 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 ZDHHC4Q9NPG8 344 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 ARHGEF4Q9NR80 690 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 PLK2Q9NYY3 685 aa19.55■□□□□ 0.72
USP39-209ENST00000458268 SYCE3A1L190 88 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 ANTXRLA6NF34 631 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 E5RJQ4 531 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 GFRA3O60609 400 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 FBXO21O94952 628 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 NBL1P41271 181 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 PXNP49023 591 aaPredicted RBP19.54■□□□□ 0.72
USP39-209ENST00000458268 SFTPA1Q8IWL2 248 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 SYNPOQ8N3V7 929 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 C1orf131Q8NDD1 294 aaKnown RBP19.54■□□□□ 0.72
USP39-209ENST00000458268 EZH1Q92800 747 aaPredicted RBP19.54■□□□□ 0.72
USP39-209ENST00000458268 SYNCQ9H7C4 482 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 NLRC4Q9NPP4 1024 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 PRMT8Q9NR22 394 aaPredicted RBP19.54■□□□□ 0.72
USP39-209ENST00000458268 DNAJC17Q9NVM6 304 aaKnown RBP19.54■□□□□ 0.72
USP39-209ENST00000458268 TJP2Q9UDY2 1190 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 CYTH4Q9UIA0 394 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 SLC8A2Q9UPR5 921 aa19.54■□□□□ 0.72
USP39-209ENST00000458268 CHURC1-FNTBB4DL54 471 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 CAPN9O14815 690 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 GREM1O60565 184 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 NCAM1P13591 858 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 UCHL3P15374 230 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 CLCN1P35523 988 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 ACADSBP45954 432 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 FNTBP49356 437 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 POLR2FP61218 127 aaKnown RBP19.53■□□□□ 0.72
USP39-209ENST00000458268 UBXN1Q04323 297 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 DMWDQ09019 674 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 MESP2Q0VG99 397 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 PDCLQ13371 301 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 SYCP1Q15431 976 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 CCDC33Q8N5R6 958 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 KIAA1958Q8N8K9 716 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 IRGQQ8WZA9 623 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 HINFPQ9BQA5 517 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 DCLK3Q9C098 648 aa19.53■□□□□ 0.72
USP39-209ENST00000458268 FANCMQ8IYD8 2048 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 TBC1D3BA6NDS4 549 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.52■□□□□ 0.72
USP39-209ENST00000458268 TRIM24O15164 1050 aa19.52■□□□□ 0.72
USP39-209ENST00000458268 TSPAN3O60637 253 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms