RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 LLGL2Q6P1M3 1020 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 MAMDC4Q6UXC1 1216 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 ACAD11Q709F0 780 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 METTL3Q86U44 580 aaKnown RBP7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 ZNF677Q86XU0 584 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 ANKRD13CQ8N6S4 541 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 PCYOX1LQ8NBM8 494 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 GLIS3Q8NEA6 775 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 GIPC3Q8TF64 312 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 NOC3LQ8WTT2 800 aaKnown RBP7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 DDI1Q8WTU0 396 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 UCMAQ8WVF2 138 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 NUDCD1Q96RS6 583 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 FGFBP2Q9BYJ0 223 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 SEMA6BQ9H3T3 888 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 HAUS4Q9H6D7 363 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 BCAS3Q9H6U6 928 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 MRPL44Q9H9J2 332 aaKnown RBP7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 NEK6Q9HC98 313 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 SELENONQ9NZV5 590 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 TCEAL9Q9UHQ7 104 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 RABGEF1Q9UJ41 708 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 PADI4Q9UM07 663 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 FAF1Q9UNN5 650 aaPredicted RBP7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 TMEM5Q9Y2B1 443 aa7.09□□□□□ -1.27
CUBNP3-201ENST00000457461 CASP8AP2Q9UKL3 1982 aa7.09□□□□□ -1.28
CUBNP3-201ENST00000457461 UBE4BO95155 1302 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 FAM170AA1A519 330 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ASB14A6NK59 587 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 LACTBL1A8MY62 500 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 F8W810 466 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ZNF701M0R085 212 aaPredicted RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 TK2O00142 265 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 POLR1CO15160 346 aaPredicted RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 EIF3DO15371 548 aaKnown RBP eCLIP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 KLHL41O60662 606 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 DKC1O60832 514 aaKnown RBP eCLIP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 COBLO75128 1261 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 SUN1O94901 812 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 UNC5CO95185 931 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 GJB6O95452 261 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 HLA-DRAP01903 254 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 PGK2P07205 417 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 PSAPP07602 524 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 RETP07949 1114 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 SUPT20HL2P0C7V6 817 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 SPATA31D3P0C874 917 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 P4HA1P13674 534 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 EEF1GP26641 437 aaKnown RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ADORA2AP29274 412 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 AXLP30530 894 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 MAPK4P31152 587 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 YWHABP31946 246 aaKnown RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 PBX1P40424 430 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ZNF157P51786 506 aaPredicted RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 P2RX3P56373 397 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 NUP107P57740 925 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ACTR2P61160 394 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 DAB2P98082 770 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 CREB5Q02930 508 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 GOLGA8FQ08AF8 430 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 GOLGA8DPQ0D2H9 430 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ACVR2BQ13705 512 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 NR1I3Q14994 352 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 STK11Q15831 433 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ANKRD40Q6AI12 368 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 METTL7BQ6UX53 244 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 LRRC55Q6ZSA7 311 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 SPATA31D4Q6ZUB0 917 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 RNF135Q8IUD6 432 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 CCDC60Q8IWA6 550 aaPredicted RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 DAW1Q8N136 415 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 SLC35F6Q8N357 371 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 RIBC1Q8N443 379 aaPredicted RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 RNF169Q8NCN4 708 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 LRRC8CQ8TDW0 803 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 SCFD1Q8WVM8 642 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 NXPE3Q969Y0 559 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ARL5BQ96KC2 179 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 CEP170P1Q96L14 293 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 GAL3ST1Q99999 423 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 STRA6Q9BX79 667 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 FOXP3Q9BZS1 431 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 TRIM15Q9C019 465 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 KATNBL1Q9H079 304 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 KCTD10Q9H3F6 313 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 DENND2DQ9H6A0 471 aaPredicted RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 NLRC4Q9NPP4 1024 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 MAPRE3Q9UPY8 281 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 COL4A3BPQ9Y5P4 624 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 MAFBQ9Y5Q3 323 aaPredicted RBP7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ZSWIM8A7E2V4 1837 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 TRAV6A0A075B6T7 132 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 WDR91A4D1P6 747 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ARHGEF35A5YM69 484 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 FAM172BPA6NC97 362 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 OR5K3A6NET4 321 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 LRRC72A6NJI9 287 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 APOL1O14791 398 aa7.08□□□□□ -1.28
CUBNP3-201ENST00000457461 ZW10O43264 779 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms