RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 E7ENQ6 273 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 GPD2P43304 727 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 DRAP1Q14919 205 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 PREPLQ4J6C6 727 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 SMYD5Q6GMV2 418 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 TSSK4Q6SA08 328 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 Q6ZS52 159 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 ALYREFQ86V81 257 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 SCUBE3Q8IX30 993 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 SCML4Q8N228 414 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 AOPEPQ8N6M6 819 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 NAT16Q8N8M0 369 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 ATRIPQ8WXE1 791 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 PNKPQ96T60 521 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 PHOX2BQ99453 314 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 SPHK2Q9NRA0 654 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 CEP83Q9Y592 693 aa18.93■□□□□ 0.62
PDLIM2-215ENST00000456545 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 SART1O43290 800 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 STC2O76061 302 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 APODP05090 189 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 COPB1P53618 953 aaKnown RBP18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 NRLP54845 237 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 MEA1Q16626 185 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 ZNF528Q3MIS6 628 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 NAIF1Q69YI7 327 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 MAMSTRQ6ZN01 415 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 TPGS1Q6ZTW0 290 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 NUDT18Q6ZVK8 323 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 STK32AQ8WU08 396 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 FAM149B1Q96BN6 582 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 NOX5Q96PH1 765 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 WDR35Q9P2L0 1181 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 AJAP1Q9UKB5 411 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 MUC6Q6W4X9 2439 aa18.92■□□□□ 0.62
PDLIM2-215ENST00000456545 RNF40O75150 1001 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 LTFP02788 710 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 UCHL3P15374 230 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 CHKAP35790 457 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 OPRD1P41143 372 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 NBL1P41271 181 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 SLC6A11P48066 632 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 HARS2P49590 506 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 MRE11P49959 708 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 SNX16P57768 344 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 SATB1Q01826 763 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 UBXN1Q04323 297 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 KLHL40Q2TBA0 621 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 TMEM25Q86YD3 366 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 DENND1CQ8IV53 801 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 FMNL3Q8IVF7 1028 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 MAML2Q8IZL2 1156 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 NKD2Q969F2 451 aaPredicted RBP18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 XPO6Q96QU8 1125 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 BBS2Q9BXC9 721 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 DEC1Q9P2X7 70 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 LIMA1Q9UHB6 759 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 SFMBT1Q9UHJ3 866 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 SLC8A2Q9UPR5 921 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 FHOD1Q9Y613 1164 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 R4GN57 208 aa18.91■□□□□ 0.62
PDLIM2-215ENST00000456545 NEDD8-MDP1E9PL57 170 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 CAPN9O14815 690 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 PNMA6AP0CW24 399 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 CORO1AP31146 461 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 CLCN1P35523 988 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 EIF2DP41214 584 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 GAS6Q14393 721 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 SLC47A2Q86VL8 602 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 PASD1Q8IV76 773 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 FAM71AQ8IYT1 594 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 CLEC4CQ8WTT0 213 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 PLD4Q96BZ4 506 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 TRIM62Q9BVG3 475 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 FAM126AQ9BYI3 521 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 STK33Q9BYT3 514 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 SYNCQ9H7C4 482 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 PLCB1Q9NQ66 1216 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 ARHGEF4Q9NR80 690 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 FAM207AQ9NSI2 230 aaPredicted RBP18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 ZSCAN32Q9NX65 697 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 HBS1LQ9Y450 684 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 CACNA1IQ9P0X4 2223 aa18.9■□□□□ 0.62
PDLIM2-215ENST00000456545 MYOFQ9NZM1 2061 aa18.89■□□□□ 0.62
PDLIM2-215ENST00000456545 GABBR2O75899 941 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 CYBBP04839 570 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 NCAM1P13591 858 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 ZNF165P49910 485 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 SEC13P55735 322 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 KDSRQ06136 332 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 BHLHA9Q7RTU4 235 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 NEK11Q8NG66 645 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 RPLP0P6Q8NHW5 317 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 BHMTQ93088 406 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 PPP1R13BQ96KQ4 1090 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 SPAG5Q96R06 1193 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 BPIFA3Q9BQP9 254 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 SLC4A5Q9BY07 1137 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 LHX5Q9H2C1 402 aa18.89■□□□□ 0.61
PDLIM2-215ENST00000456545 SEMA4AQ9H3S1 761 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms