RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 RPS9P46781 194 aaKnown RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 SOX9P48436 509 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 VCPP55072 806 aaKnown RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 FANCCQ00597 558 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 NR1I3Q14994 352 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 MSANTD2Q6P1R3 559 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 BEND5Q7L4P6 421 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 CACNA2D4Q7Z3S7 1137 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 NOP9Q86U38 636 aaKnown RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 ADGRG2Q8IZP9 1017 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 WDTC1Q8N5D0 677 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 TMEM105Q8N8V8 129 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 TMEM35BQ8NCS4 154 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 C1orf131Q8NDD1 294 aaKnown RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 TTC16Q8NEE8 873 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 IPO4Q8TEX9 1081 aaKnown RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 RNF139Q8WU17 664 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 CLDN23Q96B33 292 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 PPP1R13BQ96KQ4 1090 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 NAP1L5Q96NT1 182 aaPredicted RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 FOXQ1Q9C009 403 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 PDCL3Q9H2J4 239 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 LINC00597Q9H2U6 94 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 TSPY26PQ9H489 355 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 MARCH2Q9P0N8 246 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 DLGAP2Q9P1A6 1054 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 RASAL2Q9UJF2 1139 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 NOCTQ9UK39 431 aaKnown RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 LSM7Q9UK45 103 aaKnown RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 NUDT5Q9UKK9 219 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 HCN4Q9Y3Q4 1203 aa8.9□□□□□ -0.98
SP140-207ENST00000456542 ARIH1Q9Y4X5 557 aaPredicted RBP8.9□□□□□ -0.98
SP140-207ENST00000456542 TRIOO75962 3097 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CACNA1IQ9P0X4 2223 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CACNA1HO95180 2353 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 FAM170BA6NMN3 283 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 PIK3R2O00459 728 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 TRDMT1O14717 391 aaKnown RBP8.89□□□□□ -0.99
SP140-207ENST00000456542 MDM4O15151 490 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 PI15O43692 258 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 STC2O76061 302 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 GFPT2O94808 682 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 ADH1CP00326 375 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CYP1A1P04798 512 aaPredicted RBP8.89□□□□□ -0.99
SP140-207ENST00000456542 CYP17A1P05093 508 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 GLI1P08151 1106 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CCDC172P0C7W6 258 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 IRF1P10914 325 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CD72P21854 359 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 GJA4P35212 333 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 GABRB2P47870 512 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 ZNF445P59923 1031 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CDR2Q01850 454 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 EFEMP1Q12805 493 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 NNTQ13423 1086 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 UBXN2BQ14CS0 331 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 DHCR24Q15392 516 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 PTPN20Q4JDL3 420 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 FIGNQ5HY92 759 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 TXNDC11Q6PKC3 985 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 Q6ZNB5 142 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 MIB1Q86YT6 1006 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 ZDHHC17Q8IUH5 632 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 PASD1Q8IV76 773 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 BBS7Q8IWZ6 715 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 SCUBE3Q8IX30 993 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 ZNF687Q8N1G0 1237 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CLEC4CQ8WTT0 213 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 NDRG1Q92597 394 aaKnown RBP8.89□□□□□ -0.99
SP140-207ENST00000456542 EDEM1Q92611 657 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 EXOC4Q96A65 974 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 PLD4Q96BZ4 506 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 IQCDQ96DY2 449 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CHFRQ96EP1 664 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 CPXM1Q96SM3 734 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 IER2Q9BTL4 223 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 EDEM3Q9BZQ6 932 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 DCLK3Q9C098 648 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 MIS12Q9H081 205 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 ASNSD1Q9NWL6 643 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 ZNF510Q9Y2H8 683 aa8.89□□□□□ -0.99
SP140-207ENST00000456542 HBS1LQ9Y450 684 aaKnown RBP8.89□□□□□ -0.99
SP140-207ENST00000456542 MUC6Q6W4X9 2439 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 SLC12A8A0AV02 714 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 LATS1O95835 1130 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 FYNP06241 537 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 TPM3P06753 285 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 MMEP08473 750 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 FERP16591 822 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 SCNN1AP37088 669 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 PBX1P40424 430 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 EIF2DP41214 584 aaKnown RBP8.88□□□□□ -0.99
SP140-207ENST00000456542 UBASH3AP57075 661 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 YWHAZP63104 245 aaKnown RBP8.88□□□□□ -0.99
SP140-207ENST00000456542 NOMO3P69849 1222 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 FMO1Q01740 532 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 RING1Q06587 406 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 FZD5Q13467 585 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 LRRC32Q14392 662 aa8.88□□□□□ -0.99
SP140-207ENST00000456542 TRIP4Q15650 581 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms