RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 USP41Q3LFD5 358 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 CTXN3Q4LDR2 81 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 PAN2Q504Q3 1202 aaKnown RBP7.8□□□□□ -1.16
ERCC3-204ENST00000456257 DCAF6Q58WW2 860 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 ANKRD20A8PQ5CZ79 823 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 EMC10Q5UCC4 262 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 SNX30Q5VWJ9 437 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 ZNF280DQ6N043 979 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 KCNT2Q6UVM3 1135 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 DDX53Q86TM3 631 aaKnown RBP7.8□□□□□ -1.16
ERCC3-204ENST00000456257 TMEM173Q86WV6 379 aaPredicted RBP7.8□□□□□ -1.16
ERCC3-204ENST00000456257 SPATA2LQ8IUW3 424 aaPredicted RBP7.8□□□□□ -1.16
ERCC3-204ENST00000456257 CCDC105Q8IYK2 499 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 NUP93Q8N1F7 819 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 SIX6OS1Q8N1H7 587 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 SLC39A11Q8N1S5 342 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 TMEM199Q8N511 208 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 CCDC89Q8N998 374 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 SPPL2BQ8TCT7 592 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 CCHCR1Q8TD31 782 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 C1orf74Q96LT6 269 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 HAPLN3Q96S86 360 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 SNRNP25Q9BV90 132 aaKnown RBP7.8□□□□□ -1.16
ERCC3-204ENST00000456257 TTLL2Q9BWV7 592 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 VN1R3Q9BXE9 311 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 PPP1R12CQ9BZL4 782 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 PHACTR1Q9C0D0 580 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 FBXO44Q9H4M3 255 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 IL23AQ9NPF7 189 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 ABCC13Q9NSE7 274 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 CLIC5Q9NZA1 410 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 CWC15Q9P013 229 aaKnown RBP7.8□□□□□ -1.16
ERCC3-204ENST00000456257 PCSK1NQ9UHG2 260 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 RASAL2Q9UJF2 1139 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 DNPEPQ9ULA0 475 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 STAP1Q9ULZ2 295 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 NFU1Q9UMS0 254 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 NAALADL1Q9UQQ1 740 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 ATP11BQ9Y2G3 1177 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 PCDHB5Q9Y5E4 795 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 NFS1Q9Y697 457 aa7.8□□□□□ -1.16
ERCC3-204ENST00000456257 KIAA0100Q14667 2235 aaKnown RBP7.8□□□□□ -1.16
ERCC3-204ENST00000456257 KCNU1A8MYU2 1149 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 I6L893 689 aaPredicted RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 AGPSO00116 658 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 SMAPO00193 183 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 NDC80O14777 642 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ZNF189O75820 626 aaPredicted RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 RTN3O95197 1032 aaPredicted RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 GAS8O95995 478 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 MYCP01106 439 aaPredicted RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 AMHP03971 560 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 CSF2RAP15509 400 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 TGM2P21980 687 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 SSR1P43307 286 aaKnown RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 MAGEA6P43360 314 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 PSEN1P49768 467 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 CDH6P55285 790 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 WDR5P61964 334 aaKnown RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 PITX1P78337 314 aaPredicted RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 MMRN1Q13201 1228 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 RAB33AQ14088 237 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 DPYSQ14117 519 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 SMC1AQ14683 1233 aaKnown RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 PAFAH1B3Q15102 231 aaKnown RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 NOMO1Q15155 1222 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 CA9Q16790 459 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ZC3H12AQ5D1E8 599 aaKnown RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 KCNT1Q5JUK3 1230 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 BRMS1LQ5PSV4 323 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 RTP2Q5QGT7 225 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ACBD5Q5T8D3 534 aaPredicted RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 TPGS2Q68CL5 300 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 C4orf22Q6V702 233 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 DEFB128Q7Z7B8 93 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 DDX42Q86XP3 938 aaKnown RBP eCLIP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ARHGAP18Q8N392 663 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ATAD1Q8NBU5 361 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 BBOF1Q8ND07 529 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 SCAMP5Q8TAC9 235 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ZNF461Q8TAF7 563 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ACTL9Q8TC94 416 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 HASPINQ8TF76 798 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ATG4AQ8WYN0 398 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 CLP1Q92989 425 aaKnown RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 SLC39A13Q96H72 371 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 MYRFLQ96LU7 910 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 CSPG4P5Q96PW8 444 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 SH3GL2Q99962 352 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 TRIM51Q9BSJ1 452 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 TMEM109Q9BVC6 243 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 TMEM106CQ9BVX2 250 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 RHOBTB2Q9BYZ6 727 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 NEUROG2Q9H2A3 272 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ZWILCHQ9H900 591 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 RXFP1Q9HBX9 757 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 PCDH9Q9HC56 1237 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 NGRNQ9NPE2 291 aaKnown RBP7.79□□□□□ -1.16
ERCC3-204ENST00000456257 PIGVQ9NUD9 493 aa7.79□□□□□ -1.16
ERCC3-204ENST00000456257 ARHGEF38Q9NXL2 777 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms