RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 CADM4Q8NFZ8 388 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 RHBDD1Q8TEB9 315 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 CRELD1Q96HD1 420 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 CLIC6Q96NY7 704 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 CDC6Q99741 560 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 SMYD3Q9H7B4 428 aa24.55■■□□□ 1.52
PTPRA-208ENST00000455631 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.55■■□□□ 1.522e-6■■■■■ 71
PTPRA-208ENST00000455631 URB1O60287 2271 aaKnown RBP24.55■■□□□ 1.52
PTPRA-208ENST00000455631 MYH10P35580 1976 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 FAM92AA1XBS5 289 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 FLRT2O43155 660 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 TBX18O95935 607 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 MYL6P60660 151 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 HLA-BQ31612 363 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 PAQR9Q6ZVX9 377 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 METTL3Q86U44 580 aaKnown RBP24.54■■□□□ 1.52
PTPRA-208ENST00000455631 HPS3Q969F9 1004 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 KLF16Q9BXK1 252 aaPredicted RBP24.54■■□□□ 1.52
PTPRA-208ENST00000455631 MKRN2Q9H000 416 aaKnown RBP24.54■■□□□ 1.52
PTPRA-208ENST00000455631 TLR8Q9NR97 1041 aaKnown RBP24.54■■□□□ 1.52
PTPRA-208ENST00000455631 COMMD8Q9NX08 183 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 PLK2Q9NYY3 685 aa24.54■■□□□ 1.52
PTPRA-208ENST00000455631 TRABD2BA6NFA1 517 aa24.53■■□□□ 1.52
PTPRA-208ENST00000455631 KCNJ18B7U540 433 aa24.53■■□□□ 1.52
PTPRA-208ENST00000455631 AP1G2O75843 785 aa24.53■■□□□ 1.52
PTPRA-208ENST00000455631 BNC1Q01954 994 aa24.53■■□□□ 1.52
PTPRA-208ENST00000455631 RABEP1Q15276 862 aa24.53■■□□□ 1.52
PTPRA-208ENST00000455631 GALNT15Q8N3T1 639 aa24.53■■□□□ 1.52
PTPRA-208ENST00000455631 ADAM32Q8TC27 787 aa24.53■■□□□ 1.52
PTPRA-208ENST00000455631 ITM2CQ9NQX7 267 aa24.53■■□□□ 1.52
PTPRA-208ENST00000455631 CISD3P0C7P0 127 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 TPMTP51580 245 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 CDH8P55286 799 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 CYP24A1Q07973 514 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 PSMD6Q15008 389 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 CACUL1Q86Y37 369 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 SYAP1Q96A49 352 aaPredicted RBP24.52■■□□□ 1.52
PTPRA-208ENST00000455631 TNIP3Q96KP6 325 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 PANK2Q9BZ23 570 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 XYLT2Q9H1B5 865 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 FBXO44Q9H4M3 255 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 EIF2B4Q9UI10 523 aaKnown RBP24.52■■□□□ 1.52
PTPRA-208ENST00000455631 PCDHGB2Q9Y5G2 931 aa24.52■■□□□ 1.52
PTPRA-208ENST00000455631 SRPRBQ9Y5M8 271 aaKnown RBP24.52■■□□□ 1.52
PTPRA-208ENST00000455631 FAM149AA5PLN7 773 aa24.51■■□□□ 1.51
PTPRA-208ENST00000455631 METTL12A8MUP2 240 aa24.51■■□□□ 1.51
PTPRA-208ENST00000455631 DKK1O94907 266 aa24.51■■□□□ 1.51
PTPRA-208ENST00000455631 STAU1O95793 577 aaKnown RBP24.51■■□□□ 1.51
PTPRA-208ENST00000455631 NEFLP07196 543 aa24.51■■□□□ 1.51
PTPRA-208ENST00000455631 ATP5C1P36542 298 aaKnown RBP24.51■■□□□ 1.51
PTPRA-208ENST00000455631 CYP2J2P51589 502 aa24.51■■□□□ 1.51
PTPRA-208ENST00000455631 SCARA5Q6ZMJ2 495 aa24.51■■□□□ 1.51
PTPRA-208ENST00000455631 FUKQ8N0W3 1084 aa24.51■■□□□ 1.51
PTPRA-208ENST00000455631 ZMIZ2Q8NF64 920 aa24.51■■□□□ 1.51
PTPRA-208ENST00000455631 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.51■■□□□ 1.51
PTPRA-208ENST00000455631 GOLGA4Q13439 2230 aaKnown RBP24.5■■□□□ 1.51
PTPRA-208ENST00000455631 A0A087WV48 116 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 A0A087X0B3 334 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 A0A1B0GVT2 93 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 SYNCRIPO60506 623 aaKnown RBP24.5■■□□□ 1.51
PTPRA-208ENST00000455631 PHACTR2O75167 634 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 CCDC130P13994 396 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 OXTRP30559 389 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 ATICP31939 592 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 HOXD13P35453 343 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 IL12RB1P42701 662 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 CCDC157Q569K6 752 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 TMPRSS6Q8IU80 811 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 SCUBE3Q8IX30 993 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 SNX19Q92543 992 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 PRCCQ92733 491 aaPredicted RBP24.5■■□□□ 1.51
PTPRA-208ENST00000455631 SIPA1Q96FS4 1042 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 DCBLD2Q96PD2 775 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 SMOQ99835 787 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 CYLDQ9NQC7 956 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 AGPAT3Q9NRZ7 376 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 BTBD3Q9Y2F9 522 aa24.5■■□□□ 1.51
PTPRA-208ENST00000455631 SETXQ7Z333 2677 aaKnown RBP24.49■■□□□ 1.51
PTPRA-208ENST00000455631 TMEM131Q92545 1883 aa24.49■■□□□ 1.51
PTPRA-208ENST00000455631 VPS37CA5D8V6 355 aaPredicted RBP24.49■■□□□ 1.51
PTPRA-208ENST00000455631 BEST1O76090 585 aa24.49■■□□□ 1.51
PTPRA-208ENST00000455631 CD2BP2O95400 341 aaKnown RBP24.49■■□□□ 1.51
PTPRA-208ENST00000455631 MAP3K7CLP57077 242 aa24.49■■□□□ 1.51
PTPRA-208ENST00000455631 ZNF699Q32M78 642 aa24.49■■□□□ 1.51
PTPRA-208ENST00000455631 DBX2Q6ZNG2 339 aa24.49■■□□□ 1.51
PTPRA-208ENST00000455631 ACOT1Q86TX2 421 aa24.49■■□□□ 1.51
PTPRA-208ENST00000455631 ZNF516Q92618 1163 aa24.49■■□□□ 1.51
PTPRA-208ENST00000455631 UBL7Q96S82 380 aaPredicted RBP24.49■■□□□ 1.51
PTPRA-208ENST00000455631 MDM4O15151 490 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 CLIC2O15247 247 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 CYP26A1O43174 497 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 PRB1P04280 392 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 ACADMP11310 421 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 ABCG1P45844 678 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 CSNK1EP49674 416 aaKnown RBP24.48■■□□□ 1.51
PTPRA-208ENST00000455631 ZNF132P52740 706 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 C19orf57Q0VDD7 668 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 CAMK2BQ13554 666 aa24.48■■□□□ 1.51
PTPRA-208ENST00000455631 SUZ12Q15022 739 aaKnown RBP24.48■■□□□ 1.51
PTPRA-208ENST00000455631 GEN1Q17RS7 908 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms