RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ZNF513Q8N8E2 541 aaPredicted RBP16.91■□□□□ 0.3
GPC1-206ENST00000455111 ERCC4Q92889 916 aaPredicted RBP16.91■□□□□ 0.3
GPC1-206ENST00000455111 DUSP16Q9BY84 665 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 SLC6A17Q9H1V8 727 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 FBXO10Q9UK96 956 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 CLEC4EQ9ULY5 219 aa16.91■□□□□ 0.3
GPC1-206ENST00000455111 ASPMQ8IZT6 3477 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 TBC1D3BA6NDS4 549 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 NEDD8-MDP1E9PL57 170 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 TOP3BO95985 862 aaKnown RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 TYRP14679 529 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 PSMC2P35998 433 aaKnown RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 ATP5C1P36542 298 aaKnown RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 DHPSP49366 369 aaPredicted RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 EOGTQ5NDL2 527 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 PEAR1Q5VY43 1037 aaPredicted RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 CCDC186Q7Z3E2 898 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 ZC3H3Q8IXZ2 948 aaKnown RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 DEFB119Q8N690 84 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 CCDC26Q8TAB7 109 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 NDRG1Q92597 394 aaKnown RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 PNPLA8Q9NP80 782 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 DNAJC17Q9NVM6 304 aaKnown RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 PLK2Q9NYY3 685 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 DEC1Q9P2X7 70 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 RAD54BQ9Y620 910 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 CNOT1A5YKK6 2376 aaKnown RBP16.9■□□□□ 0.3
GPC1-206ENST00000455111 USP24Q9UPU5 2620 aa16.9■□□□□ 0.3
GPC1-206ENST00000455111 ACACBO00763 2458 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 WASH3PC4AMC7 463 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 PI4KAP42356 2102 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 PRCPP42785 496 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 RAB41Q5JT25 222 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 FYB2Q5VWT5 728 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 KRT39Q6A163 491 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 PSAPL1Q6NUJ1 521 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 KLHDC10Q6PID8 442 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 CYP2U1Q7Z449 544 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 FMR1NBQ8N0W7 255 aaPredicted RBP16.89■□□□□ 0.29
GPC1-206ENST00000455111 UBR7Q8N806 425 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 RBBP8NLQ8NC74 664 aaPredicted RBP16.89■□□□□ 0.29
GPC1-206ENST00000455111 ENGASEQ8NFI3 743 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 PIGKQ92643 395 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 GABRG3Q99928 467 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 BBS2Q9BXC9 721 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 POLMQ9NP87 494 aaPredicted RBP16.89■□□□□ 0.29
GPC1-206ENST00000455111 CISHQ9NSE2 258 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 CALCOCO1Q9P1Z2 691 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 PCDHA5Q9Y5H7 936 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 EPG5Q9HCE0 2579 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 CKAP5Q14008 2032 aa16.89■□□□□ 0.29
GPC1-206ENST00000455111 CHD8Q9HCK8 2581 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 ASCC3Q8N3C0 2202 aaKnown RBP16.88■□□□□ 0.29
GPC1-206ENST00000455111 GABBR2O75899 941 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 HOXB2P14652 356 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 NDUFV2P19404 249 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 ITPKAP23677 461 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 EDRF1Q3B7T1 1238 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 GRAMD4Q6IC98 578 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 SLC41A1Q8IVJ1 513 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 ZNF276Q8N554 614 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 DDX1Q92499 740 aaKnown RBP16.88■□□□□ 0.29
GPC1-206ENST00000455111 BHMTQ93088 406 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 NACA2Q9H009 215 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 NAGPAQ9UK23 515 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 PILRBQ9UKJ0 227 aa16.88■□□□□ 0.29
GPC1-206ENST00000455111 IGHV1OR15-9A0A0B4J2B8 117 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 TRIM49BA6NDI0 452 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 KHNYNO15037 678 aaKnown RBP16.87■□□□□ 0.29
GPC1-206ENST00000455111 ALDH1A2O94788 518 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 PENKP01210 267 aaPredicted RBP16.87■□□□□ 0.29
GPC1-206ENST00000455111 KRT13P13646 458 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 NTSR1P30989 418 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 MXI1P50539 228 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 SHC2P98077 582 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 GEN1Q17RS7 908 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 C10orf120Q5SQS8 335 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 BTBD8Q5XKL5 378 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 ARHGAP17Q68EM7 881 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 ANKRD40Q6AI12 368 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 PIGZQ86VD9 579 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 C11orf74Q86VG3 221 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 KCNV2Q8TDN2 545 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 IPO4Q8TEX9 1081 aaKnown RBP16.87■□□□□ 0.29
GPC1-206ENST00000455111 TMEM176AQ96HP8 235 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 ZSWIM1Q9BR11 485 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 RAB20Q9NX57 234 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 CACNA2D2Q9NY47 1150 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 EVLQ9UI08 416 aaPredicted RBP16.87■□□□□ 0.29
GPC1-206ENST00000455111 DNMT3LQ9UJW3 386 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 COQ4Q9Y3A0 265 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 TPRP12270 2363 aaKnown RBP16.87■□□□□ 0.29
GPC1-206ENST00000455111 SPEGQ15772 3267 aa16.87■□□□□ 0.29
GPC1-206ENST00000455111 GTF2H1P32780 548 aa16.86■□□□□ 0.29
GPC1-206ENST00000455111 PLA2G4AP47712 749 aa16.86■□□□□ 0.29
GPC1-206ENST00000455111 TRIM61Q5EBN2 209 aa16.86■□□□□ 0.29
GPC1-206ENST00000455111 LPCAT2Q7L5N7 544 aa16.86■□□□□ 0.29
GPC1-206ENST00000455111 FBXL13Q8NEE6 735 aa16.86■□□□□ 0.29
GPC1-206ENST00000455111 SPATA20Q8TB22 786 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms