RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GJB3O75712 270 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 RTN3O95197 1032 aaPredicted RBP6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KIF20AO95235 890 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TRIM49P0CI25 452 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TRIM49CP0CI26 452 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HLA-EP13747 358 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CD58P19256 250 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PRKCHP24723 683 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NTSR1P30989 418 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PIK3CAP42336 1068 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 IL12RB1P42701 662 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 AFMP43652 599 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ASPAP45381 313 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NUMBP49757 651 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NDST1P52848 882 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 BNC1Q01954 994 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NCOA4Q13772 614 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 STK38Q15208 465 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GEN1Q17RS7 908 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DUOXA1Q1HG43 343 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 C10orf120Q5SQS8 335 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SHC4Q6S5L8 630 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 LRSAM1Q6UWE0 723 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 RAB44Q7Z6P3 723 aaPredicted RBP6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PDZD3Q86UT5 571 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PROSER1Q86XN7 944 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 XXYLT1Q8NBI6 393 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TOE1Q96GM8 510 aaKnown RBP6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GPR174Q9BXC1 333 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TNMDQ9H2S6 317 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MMRN2Q9H8L6 949 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PRDM16Q9HAZ2 1276 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ASH1LQ9NR48 2969 aaKnown RBP6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TBC1D14Q9P2M4 693 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TFIP11Q9UBB9 837 aaKnown RBP6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CLEC4EQ9ULY5 219 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SLC6A14Q9UN76 642 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 BTBD3Q9Y2F9 522 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GPSM3Q9Y4H4 160 aa6.33□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MAST4O15021 2626 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PLXNA2O75051 1894 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NYNRINQ9P2P1 1898 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KNTC1P50748 2209 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HHLA1C9JL84 531 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CBX4O00257 560 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EXOC3O60645 756 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EIF5BO60841 1220 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NDUFS2O75306 463 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KLKB1P03952 638 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PRB1P04280 392 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZDHHC11BP0C7U3 371 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FAM200BP0CF97 657 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NCAM1P13591 858 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PFKLP17858 780 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ACO1P21399 889 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TNFRSF4P43489 277 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DGKGP49619 791 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TUBP50607 506 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EHHADHQ08426 723 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CUL4AQ13619 759 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CUL4BQ13620 913 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SLC39A14Q15043 492 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TRIP6Q15654 476 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HSF5Q4G112 596 aaPredicted RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ZNF667Q5HYK9 610 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CLEC20AQ6ZU45 233 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 STXBP4Q6ZWJ1 553 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 TRMT11Q7Z4G4 463 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SLCO6A1Q86UG4 719 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KIAA0895Q8NCT3 520 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 PDZD8Q8NEN9 1154 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CCDC26Q8TAB7 109 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SETD7Q8WTS6 366 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 HNRNPLLQ8WVV9 542 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NDRG1Q92597 394 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SYAP1Q96A49 352 aaPredicted RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EEF2KMTQ96G04 330 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 LRIG1Q96JA1 1093 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 ARID3AQ99856 593 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 GABRG3Q99928 467 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KLF16Q9BXK1 252 aaPredicted RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CIPCQ9C0C6 399 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 DNAAF2Q9NVR5 837 aaKnown RBP6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KBTBD4Q9NVX7 518 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 EHD2Q9NZN4 543 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 RASAL2Q9UJF2 1139 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 NAGPAQ9UK23 515 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 STON1Q9Y6Q2 735 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MGAQ8IWI9 3026 aa6.32□□□□□ -1.4
HLA-DPA3-207ENST00000454398 UBE4BO95155 1302 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 A0A0A0MRY4 1105 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 A0A1B0GVT2 93 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 A0A1W2PQD8 194 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 FAM92AA1XBS5 289 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CYSRT1A8MQ03 144 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 KCNK3O14649 394 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 SPTLC2O15270 562 aa6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 POLR2DO15514 142 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 MSI1O43347 362 aaKnown RBP6.31□□□□□ -1.4
HLA-DPA3-207ENST00000454398 CILPO75339 1184 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms