RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 MOSPD3O75425 235 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 ECI2O75521 394 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 OLFM2O95897 454 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 CYP1A1P04798 512 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-205ENST00000453441 USP17L7P0C7H9 530 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 PNMA6AP0CW24 399 aaPredicted RBP9.14□□□□□ -0.95
COL28A1-205ENST00000453441 TCF3P15923 654 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 CEBPBP17676 345 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 TNFAIP3P21580 790 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 CASP14P31944 242 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 AVPR1AP37288 418 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 CCR2P41597 374 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 NTHL1P78549 312 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 FMO1Q01740 532 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 CENPCQ03188 943 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 GOLGA8FQ08AF8 430 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 GOLGA8DPQ0D2H9 430 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 KLHL30Q0D2K2 578 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 ADIGQ0VDE8 80 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 TEAD2Q15562 447 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 HECTD3Q5T447 861 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 GPR158Q5T848 1215 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 PMF1Q6P1K2 205 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 MRPL14Q6P1L8 145 aaKnown RBP9.14□□□□□ -0.95
COL28A1-205ENST00000453441 TOGARAM2Q6ZUX3 1019 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 IRF2BP2Q7Z5L9 587 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 TMEM150AQ86TG1 271 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 SCAMP5Q8TAC9 235 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 ITFG1Q8TB96 612 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 DEPDC1BQ8WUY9 529 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 PPP1R13BQ96KQ4 1090 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 MYADMQ96S97 322 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 DNAJC7Q99615 494 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 ZFAND3Q9H8U3 227 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 ACP6Q9NPH0 428 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 ST7Q9NRC1 585 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 ABCC13Q9NSE7 274 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 ASNSD1Q9NWL6 643 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 WDR35Q9P2L0 1181 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 IMPACTQ9P2X3 320 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 STRIP2Q9ULQ0 834 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 EYSQ5T1H1 3165 aa9.14□□□□□ -0.95
COL28A1-205ENST00000453441 GOLGA6L3A6NEY3 463 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ESPNB1AK53 854 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 C2CD4DB7Z1M9 353 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 AKR1B15C9JRZ8 316 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ANHXE9PGG2 379 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TULP2O00295 520 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 GPR37L1O60883 481 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 MFAP3LO75121 409 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TADA3O75528 432 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 OAS1P00973 400 aaKnown RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CALB1P05937 261 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CKMP06732 381 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 MMEP08473 750 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 GZMAP12544 262 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 HDCP19113 662 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 NSFP46459 744 aaKnown RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 GABRB2P47870 512 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 RGS7P49802 495 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CDR1P51861 262 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 KPNA1P52294 538 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 GSCP56915 257 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 DAOAP59103 153 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 YWHAGP61981 247 aaKnown RBP eCLIP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 NOMO3P69849 1222 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 SLC7A9P82251 487 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CYP4F8P98187 520 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CDK17Q00537 523 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ARID5AQ03989 594 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 IFRD2Q12894 506 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TBX2Q13207 712 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TDRD12Q587J7 1177 aaKnown RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 EFHC1Q5JVL4 640 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TAF3Q5VWG9 929 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 BTBD8Q5XKL5 378 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 GPRIN1Q7Z2K8 1008 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TMC6Q7Z403 805 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ERICH1Q86X53 443 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 PHF13Q86YI8 300 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CMTM8Q8IZV2 173 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CELF5Q8N6W0 485 aaKnown RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ZSCAN18Q8TBC5 510 aaPredicted RBP9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CPLX3Q8WVH0 158 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ELSPBP1Q96BH3 223 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 C18orf8Q96DM3 657 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TCEAL4Q96EI5 215 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TRIM11Q96F44 468 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 VCPIP1Q96JH7 1222 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 RPGRIP1Q96KN7 1286 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ASB16Q96NS5 453 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ULBP1Q9BZM6 244 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 NACA2Q9H009 215 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ZFP14Q9HCL3 533 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 RRN3Q9NYV6 651 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 GMIPQ9P107 970 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 CDH22Q9UJ99 828 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 NAGPAQ9UK23 515 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 ARHGAP26Q9UNA1 814 aa9.13□□□□□ -0.95
COL28A1-205ENST00000453441 TTC28Q96AY4 2481 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms