RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 RSAD2Q8WXG1 361 aa25.16■■□□□ 1.62
CPSF4-207ENST00000451876 VCPIP1Q96JH7 1222 aa25.16■■□□□ 1.62
CPSF4-207ENST00000451876 SLC2A13Q96QE2 648 aa25.16■■□□□ 1.62
CPSF4-207ENST00000451876 RPP25Q9BUL9 199 aaKnown RBP25.16■■□□□ 1.62
CPSF4-207ENST00000451876 TDP1Q9NUW8 608 aa25.16■■□□□ 1.62
CPSF4-207ENST00000451876 LIMD1Q9UGP4 676 aa25.16■■□□□ 1.62
CPSF4-207ENST00000451876 CPQQ9Y646 472 aa25.16■■□□□ 1.62
CPSF4-207ENST00000451876 MUC3AQ02505 3323 aa25.16■■□□□ 1.62
CPSF4-207ENST00000451876 ABCB4P21439 1286 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 WEE1P30291 646 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 HTR4Q13639 388 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 MTF1Q14872 753 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 MIB1Q86YT6 1006 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 DEFB106AQ8N104 65 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 PLCD3Q8N3E9 789 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 LRRC3BQ96PB8 259 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 BAG1Q99933 345 aaPredicted RBP25.15■■□□□ 1.62
CPSF4-207ENST00000451876 KXD1Q9BQD3 176 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 TRPV4Q9HBA0 871 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 WDR35Q9P2L0 1181 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 SFMBT1Q9UHJ3 866 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 RASAL2Q9UJF2 1139 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 TMEM59LQ9UK28 342 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 ARHGAP26Q9UNA1 814 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 NUMBLQ9Y6R0 609 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 ANHXE9PGG2 379 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 DAB1O75553 588 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 FLT3P36888 993 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 PITX1P78337 314 aaPredicted RBP25.15■■□□□ 1.62
CPSF4-207ENST00000451876 EMC1Q8N766 993 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 JOSD2Q8TAC2 188 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 RNF139Q8WU17 664 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 ZNF653Q96CK0 615 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 CDK5RAP1Q96SZ6 601 aaKnown RBP25.15■■□□□ 1.62
CPSF4-207ENST00000451876 PACSIN1Q9BY11 444 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 GKN1Q9NS71 199 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 DNMT3LQ9UJW3 386 aa25.15■■□□□ 1.62
CPSF4-207ENST00000451876 C19orf67A6NJJ6 358 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 CAPN9O14815 690 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 DCAF6Q58WW2 860 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 TJAP1Q5JTD0 557 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 MSANTD2Q6P1R3 559 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 BEND5Q7L4P6 421 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 TADA2BQ86TJ2 420 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 TMTC1Q8IUR5 882 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 TTC16Q8NEE8 873 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 ADAMTS19Q8TE59 1207 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 DQX1Q8TE96 717 aaKnown RBP25.14■■□□□ 1.61
CPSF4-207ENST00000451876 ANP32BQ92688 251 aaKnown RBP25.14■■□□□ 1.61
CPSF4-207ENST00000451876 NECAB3Q96P71 396 aaPredicted RBP25.14■■□□□ 1.61
CPSF4-207ENST00000451876 PLA2G2FQ9BZM2 168 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 THAP2Q9H0W7 228 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 ZFP14Q9HCL3 533 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 OLA1Q9NTK5 396 aaKnown RBP25.14■■□□□ 1.61
CPSF4-207ENST00000451876 MARCH2Q9P0N8 246 aa25.14■■□□□ 1.61
CPSF4-207ENST00000451876 ASGR2P07307 311 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 DNAJC24Q6P3W2 148 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 RAD9BQ6WBX8 426 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 MTSS1LQ765P7 747 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 ADAM32Q8TC27 787 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 PDLIM2Q96JY6 352 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 TRIM62Q9BVG3 475 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 KCNK12Q9HB15 430 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 CNOT8Q9UFF9 292 aaKnown RBP25.13■■□□□ 1.61
CPSF4-207ENST00000451876 TRIOO75962 3097 aa25.13■■□□□ 1.61
CPSF4-207ENST00000451876 MSI1O43347 362 aaKnown RBP25.12■■□□□ 1.61
CPSF4-207ENST00000451876 GALCP54803 685 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 PPP1R15BQ5SWA1 713 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 VITQ6UXI7 678 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 TAC4Q86UU9 113 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 CCDC170Q8IYT3 715 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 CELF5Q8N6W0 485 aaKnown RBP25.12■■□□□ 1.61
CPSF4-207ENST00000451876 SH3RF2Q8TEC5 729 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 WBP2Q969T9 261 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 ELSPBP1Q96BH3 223 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 SELENOOQ9BVL4 669 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 KLF16Q9BXK1 252 aaPredicted RBP25.12■■□□□ 1.61
CPSF4-207ENST00000451876 ADAM33Q9BZ11 813 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 SMOC2Q9H3U7 446 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 CD320Q9NPF0 282 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 MYO1AQ9UBC5 1043 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 HEPACAM2A8MVW5 462 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 LEFTY2O00292 366 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 IRF1P10914 325 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 KRT3P12035 628 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 RFC1P35251 1148 aaPredicted RBP25.12■■□□□ 1.61
CPSF4-207ENST00000451876 MATKP42679 507 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 RPL7AP62424 266 aaKnown RBP25.12■■□□□ 1.61
CPSF4-207ENST00000451876 USP4Q13107 963 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 MAMLD1Q13495 774 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 ZNF77Q15935 545 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 PLEKHA7Q6IQ23 1121 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 ARHGEF26Q96DR7 871 aa25.12■■□□□ 1.61
CPSF4-207ENST00000451876 SCAMP3O14828 347 aaKnown RBP25.11■■□□□ 1.61
CPSF4-207ENST00000451876 ECI2O75521 394 aa25.11■■□□□ 1.61
CPSF4-207ENST00000451876 MYBL1P10243 752 aa25.11■■□□□ 1.61
CPSF4-207ENST00000451876 TFE3P19532 575 aaPredicted RBP25.11■■□□□ 1.61
CPSF4-207ENST00000451876 NOS2P35228 1153 aa25.11■■□□□ 1.61
CPSF4-207ENST00000451876 OTUD1Q5VV17 481 aaPredicted RBP25.11■■□□□ 1.61
CPSF4-207ENST00000451876 ARCQ7LC44 396 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms