RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 TOPORSQ9NS56 1045 aaPredicted RBP6.63□□□□□ -1.35
KARSP1-201ENST00000451871 FNIP2Q9P278 1114 aa6.63□□□□□ -1.35
KARSP1-201ENST00000451871 PCDHA6Q9UN73 950 aa6.63□□□□□ -1.35
KARSP1-201ENST00000451871 PRG3Q9Y2Y8 225 aaPredicted RBP6.63□□□□□ -1.35
KARSP1-201ENST00000451871 NEUROG3Q9Y4Z2 214 aa6.63□□□□□ -1.35
KARSP1-201ENST00000451871 C4orf47A7E2U8 309 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 DDX39AO00148 427 aaKnown RBP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 ZRANB2O95218 330 aaKnown RBP eCLIP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 POMCP01189 267 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 F13BP05160 661 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 HNRNPA1P09651 372 aaKnown RBP eCLIP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 RPL17P18621 184 aaKnown RBP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 MX1P20591 662 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 KIF5BP33176 963 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 OR1G1P47890 313 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 SEPHS1P49903 392 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 TNK2Q07912 1038 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 SRSF1Q07955 248 aaKnown RBP eCLIP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 FAPQ12884 760 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 ZRSR2Q15696 482 aaKnown RBP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 UBE2SQ16763 222 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 GRAMD1BQ3KR37 738 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 DAB2IPQ5VWQ8 1189 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 TANGO2Q6ICL3 276 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 MIS18BP1Q6P0N0 1132 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 CACNA2D4Q7Z3S7 1137 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 ZNF605Q86T29 641 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 WDR5BQ86VZ2 330 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 PROSER1Q86XN7 944 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 VPS37AQ8NEZ2 397 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 DIO2Q92813 273 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 PGBD4Q96DM1 585 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 FBXL7Q9UJT9 491 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 PCDHGA5Q9Y5G8 931 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 THADAQ6YHU6 1953 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 J3QKU1 62 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 KCNK3O14649 394 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 CCL16O15467 120 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 HYAL3O43820 417 aaPredicted RBP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 C1QL1O75973 258 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 GSNP06396 782 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 HOXA6P31267 233 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 HOXC13P31276 330 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 MPLP40238 635 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 TROAPQ12815 778 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 PPM1LQ5SGD2 360 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 TCEAL6Q6IPX3 200 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 ERAP2Q6P179 960 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 CYB5R4Q7L1T6 521 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 KBTBD6Q86V97 674 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 COLGALT2Q8IYK4 626 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 GPR65Q8IYL9 337 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 ING5Q8WYH8 240 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 TCEAL3Q969E4 200 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 ELSPBP1Q96BH3 223 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 RRP36Q96EU6 259 aaKnown RBP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 MCRS1Q96EZ8 462 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 COX4I2Q96KJ9 171 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 B3GALT6Q96L58 329 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 EDEM2Q9BV94 578 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 GCOM2Q9BZD3 368 aaPredicted RBP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 BRD9Q9H8M2 597 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 RSAD1Q9HA92 442 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 LY9Q9HBG7 655 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 VPS45Q9NRW7 570 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 FBXW11Q9UKB1 542 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 KCNH3Q9ULD8 1083 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 PIN4Q9Y237 131 aaKnown RBP6.62□□□□□ -1.35
KARSP1-201ENST00000451871 PCDHB2Q9Y5E7 798 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 CAPN6Q9Y6Q1 641 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 COL4A2P08572 1712 aa6.62□□□□□ -1.35
KARSP1-201ENST00000451871 GOLGA4Q13439 2230 aaKnown RBP6.61□□□□□ -1.35
KARSP1-201ENST00000451871 F8W810 466 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 C8AP07357 584 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 SLC9A1P19634 815 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 CSRP1P21291 193 aaKnown RBP6.61□□□□□ -1.35
KARSP1-201ENST00000451871 HOXA9P31269 272 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 KIR3DL1P43629 444 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 TRAPPC10P48553 1259 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 ZNF267Q14586 743 aaPredicted RBP6.61□□□□□ -1.35
KARSP1-201ENST00000451871 ACAP2Q15057 778 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 TESK1Q15569 626 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 USP41Q3LFD5 358 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 PABPC1LQ4VXU2 614 aaKnown RBP6.61□□□□□ -1.35
KARSP1-201ENST00000451871 CEP55Q53EZ4 464 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 INO80DQ53TQ3 878 aaPredicted RBP6.61□□□□□ -1.35
KARSP1-201ENST00000451871 ZFYVE27Q5T4F4 411 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 FSTL4Q6MZW2 842 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 C22orf34Q6ZV56 151 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 MRPL10Q7Z7H8 261 aaKnown RBP6.61□□□□□ -1.35
KARSP1-201ENST00000451871 GAB3Q8WWW8 586 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 FBXW5Q969U6 566 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 YTHDC1Q96MU7 727 aaKnown RBP6.61□□□□□ -1.35
KARSP1-201ENST00000451871 AIFM3Q96NN9 605 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 KCNJ15Q99712 375 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 SLC12A9Q9BXP2 914 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 HDAC8Q9BY41 377 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 GPR62Q9BZJ7 368 aa6.61□□□□□ -1.35
KARSP1-201ENST00000451871 CLMPQ9H6B4 373 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms