RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 STX17P56962 302 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 LRRC63Q05C16 580 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 ENPEPQ07075 957 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 MESP2Q0VG99 397 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 RSPO4Q2I0M5 234 aaPredicted RBP9.14□□□□□ -0.95
RFX3-209ENST00000451859 GOLGA7BQ2TAP0 167 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 FBXO43Q4G163 708 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 C10orf120Q5SQS8 335 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 LAIR1Q6GTX8 287 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 RHBDF2Q6PJF5 856 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 ADGRG2Q8IZP9 1017 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 FAM160A2Q8N612 972 aaPredicted RBP9.14□□□□□ -0.95
RFX3-209ENST00000451859 SLC4A11Q8NBS3 891 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 NELFBQ8WX92 580 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 BHMTQ93088 406 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 ACDQ96AP0 544 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 TMEM176AQ96HP8 235 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 PNKPQ96T60 521 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 DUSP16Q9BY84 665 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 TPSD1Q9BZJ3 242 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 PARD6AQ9NPB6 346 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 ARHGEF4Q9NR80 690 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 COMMD8Q9NX08 183 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 OSER1Q9NX31 292 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 IL37Q9NZH6 218 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 TBC1D14Q9P2M4 693 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 INVSQ9Y283 1065 aa9.14□□□□□ -0.95
RFX3-209ENST00000451859 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.14□□□□□ -0.95
RFX3-209ENST00000451859 E2F8A0AVK6 867 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 FAM92AA1XBS5 289 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 K7EQS6 105 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 KAT7O95251 611 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 KLF8O95600 359 aaPredicted RBP9.13□□□□□ -0.95
RFX3-209ENST00000451859 APBB3O95704 486 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 APODP05090 189 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 CNR2P34972 360 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 ATP5C1P36542 298 aaKnown RBP9.13□□□□□ -0.95
RFX3-209ENST00000451859 FMO5P49326 533 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 TUBP50607 506 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 DGKEP52429 567 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 KIF11P52732 1056 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 INSM1Q01101 510 aaPredicted RBP9.13□□□□□ -0.95
RFX3-209ENST00000451859 GOLGA8FQ08AF8 430 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 GOLGA8DPQ0D2H9 430 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 EFEMP1Q12805 493 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 CUL2Q13617 745 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 COBLL1Q53SF7 1204 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 EMC10Q5UCC4 262 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 SNX30Q5VWJ9 437 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 BTBD8Q5XKL5 378 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 ANO7Q6IWH7 933 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 SYT13Q7L8C5 426 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 KBTBD6Q86V97 674 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 TMEM25Q86YD3 366 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 MIB1Q86YT6 1006 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 ZC3H3Q8IXZ2 948 aaKnown RBP9.13□□□□□ -0.95
RFX3-209ENST00000451859 ALLCQ8N6M5 410 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 TSTD1Q8NFU3 115 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 SPATA20Q8TB22 786 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 GAB3Q8WWW8 586 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 SLC35C1Q96A29 364 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 ERLEC1Q96DZ1 483 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 DHTKD1Q96HY7 919 aaPredicted RBP9.13□□□□□ -0.95
RFX3-209ENST00000451859 DUSP9Q99956 384 aaKnown RBP9.13□□□□□ -0.95
RFX3-209ENST00000451859 RASAL2Q9UJF2 1139 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 LSM7Q9UK45 103 aaKnown RBP9.13□□□□□ -0.95
RFX3-209ENST00000451859 SCML2Q9UQR0 700 aa9.13□□□□□ -0.95
RFX3-209ENST00000451859 NYNRINQ9P2P1 1898 aaKnown RBP9.13□□□□□ -0.95
RFX3-209ENST00000451859 TP53BP1Q12888 1972 aaPredicted RBP9.12□□□□□ -0.95
RFX3-209ENST00000451859 NEDD8-MDP1E9PL57 170 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 TULP2O00295 520 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 DCLK1O15075 740 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 TRIM24O15164 1050 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 CALCAP01258 141 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 RETP07949 1114 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 RALAP11233 206 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 BMP6P22004 513 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 GBP1P32455 592 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 GAD2Q05329 585 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 CAMK4Q16566 473 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 SGO2Q562F6 1265 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 TPGS1Q6ZTW0 290 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 DGLUCYQ7Z3D6 616 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 SCD5Q86SK9 330 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 PIGZQ86VD9 579 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 CREBRFQ8IUR6 639 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 PPM1KQ8N3J5 372 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 TTC39CQ8N584 583 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 TXNDC5Q8NBS9 432 aaKnown RBP9.12□□□□□ -0.95
RFX3-209ENST00000451859 UBA3Q8TBC4 463 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 USP33Q8TEY7 942 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 NDRG1Q92597 394 aaKnown RBP9.12□□□□□ -0.95
RFX3-209ENST00000451859 KAT5Q92993 513 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 SPSB2Q99619 263 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 BBS2Q9BXC9 721 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 KLF16Q9BXK1 252 aaPredicted RBP9.12□□□□□ -0.95
RFX3-209ENST00000451859 ARRDC1-AS1Q9H2J1 176 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 CYLDQ9NQC7 956 aa9.12□□□□□ -0.95
RFX3-209ENST00000451859 SPHK2Q9NRA0 654 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms