RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 BMT2Q1RMZ1 405 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 C1orf220Q5T0J3 134 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 CACUL1Q86Y37 369 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 SLC41A1Q8IVJ1 513 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 TERB1Q8NA31 727 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 PARD3BQ8TEW8 1205 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 SYAP1Q96A49 352 aaPredicted RBP10.74□□□□□ -0.69
LINC01004-202ENST00000450686 SMARCD1Q96GM5 515 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 INTS4Q96HW7 963 aaKnown RBP10.74□□□□□ -0.69
LINC01004-202ENST00000450686 ZNF396Q96N95 335 aaPredicted RBP10.74□□□□□ -0.69
LINC01004-202ENST00000450686 CAMK1GQ96NX5 476 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 LRRC27Q9C0I9 530 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 CUEDC2Q9H467 287 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 SPHK2Q9NRA0 654 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 DNAJC17Q9NVM6 304 aaKnown RBP10.74□□□□□ -0.69
LINC01004-202ENST00000450686 CACNA2D2Q9NY47 1150 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 EHD2Q9NZN4 543 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 DEC1Q9P2X7 70 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 PILRBQ9UKJ0 227 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 KLK13Q9UKR3 277 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 PCDHA7Q9UN72 937 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 UBE4BO95155 1302 aa10.74□□□□□ -0.69
LINC01004-202ENST00000450686 KNL1Q8NG31 2342 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 A0A1W2PQH9 124 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 HOXC11O43248 304 aaPredicted RBP10.73□□□□□ -0.69
LINC01004-202ENST00000450686 STAU1O95793 577 aaKnown RBP10.73□□□□□ -0.69
LINC01004-202ENST00000450686 ZDHHC11BP0C7U3 371 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 TYRP14679 529 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 CD58P19256 250 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 NDUFV2P19404 249 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 MAOBP27338 520 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 ASPAP45381 313 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 ME1P48163 572 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 AMPD3Q01432 767 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 BTBD8Q5XKL5 378 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 GRAMD4Q6IC98 578 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 CNNM4Q6P4Q7 775 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 C11orf74Q86VG3 221 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 DDX42Q86XP3 938 aaKnown RBP eCLIP10.73□□□□□ -0.69
LINC01004-202ENST00000450686 SYT12Q8IV01 421 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 PDZD8Q8NEN9 1154 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 CCDC26Q8TAB7 109 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 GATA6Q92908 595 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 CEP295NLQ96MC4 621 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 HSPA12BQ96MM6 686 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 BBS2Q9BXC9 721 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
LINC01004-202ENST00000450686 NUSAP1Q9BXS6 441 aaKnown RBP10.73□□□□□ -0.69
LINC01004-202ENST00000450686 MMRN2Q9H8L6 949 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 APOBEC3GQ9HC16 384 aaKnown RBP10.73□□□□□ -0.69
LINC01004-202ENST00000450686 IL37Q9NZH6 218 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 TBC1D14Q9P2M4 693 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 ATP8B3O60423 1300 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 NUMA1Q14980 2115 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 LOC400499M0QZD8 3231 aa10.73□□□□□ -0.69
LINC01004-202ENST00000450686 FASNP49327 2511 aaKnown RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 A0A0A0MRY4 1105 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 IGHV1OR15-9A0A0B4J2B8 117 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 HHLA1C9JL84 531 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 ACTN4O43707 911 aaKnown RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 YEATS4O95619 227 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 HLA-DRAP01903 254 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 CENPBP07199 599 aaPredicted RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 HMBSP08397 361 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 TRIM49P0CI25 452 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 TRIM49CP0CI26 452 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 CEACAM1P13688 526 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 CSRP1P21291 193 aaKnown RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 ATICP31939 592 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 EIF2DP41214 584 aaKnown RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 SIM1P81133 766 aaPredicted RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 KMT5BQ4FZB7 885 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 RESP18Q5W5W9 173 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 CEP135Q66GS9 1140 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 KIAA1324Q6UXG2 1013 aaKnown RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 CLEC20AQ6ZU45 233 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 C12orf56Q8IXR9 622 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 CHPFQ8IZ52 775 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 IPO4Q8TEX9 1081 aaKnown RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 OVCA2Q8WZ82 227 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 CD248Q9HCU0 757 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 EVLQ9UI08 416 aaPredicted RBP10.72□□□□□ -0.69
LINC01004-202ENST00000450686 MAPK8IP1Q9UQF2 711 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 BPTFQ12830 3046 aa10.72□□□□□ -0.69
LINC01004-202ENST00000450686 SMG1Q96Q15 3661 aaKnown RBP10.71□□□□□ -0.69
LINC01004-202ENST00000450686 FAM92AA1XBS5 289 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 C3orf80F5H4A9 247 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 KIF20AO95235 890 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 F13A1P00488 732 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 NR3C1P04150 777 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 FAM200BP0CF97 657 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 ACO1P21399 889 aaKnown RBP10.71□□□□□ -0.69
LINC01004-202ENST00000450686 NTSR1P30989 418 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 PIK3CAP42336 1068 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 GCLMP48507 274 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 DNM1Q05193 864 aaKnown RBP10.71□□□□□ -0.69
LINC01004-202ENST00000450686 ZNF33AQ06730 810 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 LMAN2Q12907 356 aa10.71□□□□□ -0.69
LINC01004-202ENST00000450686 ZACNQ401N2 412 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms