RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ADGRG2Q8IZP9 1017 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 WBP2Q969T9 261 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 ZFRQ96KR1 1074 aaKnown RBP17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 SPAG5Q96R06 1193 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 GANQ9H2C0 597 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 EPC1Q9H2F5 836 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 FBXO44Q9H4M3 255 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 IMPACTQ9P2X3 320 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 NCDNQ9UBB6 729 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 SMG5Q9UPR3 1016 aaKnown RBP17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 WDR87Q6ZQQ6 2873 aa17.93■□□□□ 0.46
PRPF40A-204ENST00000450303 OTOGLQ3ZCN5 2332 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 CFAP54Q96N23 3096 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 ANTXRLA6NF34 631 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 CYP26A1O43174 497 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 HRO43593 1189 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 TBX18O95935 607 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 CYP17A1P05093 508 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 OPRD1P41143 372 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 RAD23BP54727 409 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 RAPGEF1Q13905 1077 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 DHCR24Q15392 516 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 GAB4Q2WGN9 574 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 RRAGAQ7L523 313 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 SLC4A11Q8NBS3 891 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 TMEM176AQ96HP8 235 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 STK33Q9BYT3 514 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 NACA2Q9H009 215 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 NUCKS1Q9H1E3 243 aaKnown RBP17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 NLRC4Q9NPP4 1024 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 TLR8Q9NR97 1041 aaKnown RBP17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 OSER1Q9NX31 292 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 NUDT5Q9UKK9 219 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 LUC7L2Q9Y383 392 aaKnown RBP17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 FHOD1Q9Y613 1164 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 GPR179Q6PRD1 2367 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 GVINP1Q7Z2Y8 2422 aa17.92■□□□□ 0.46
PRPF40A-204ENST00000450303 TLR5O60602 858 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 PAPSS2O95340 614 aaPredicted RBP17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 SLC6A11P48066 632 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 ARHGAP44Q17R89 818 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 TSR1Q2NL82 804 aaKnown RBP17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 DPY19L2P1Q6NXN4 242 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 RHBDF2Q6PJF5 856 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 PRR23BQ6ZRT6 265 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 DDX42Q86XP3 938 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 RPLP0P6Q8NHW5 317 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 CPLX3Q8WVH0 158 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 EXOC4Q96A65 974 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 DUSP16Q9BY84 665 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 NMUR1Q9HB89 426 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 MYO6Q9UM54 1294 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 CAPN11Q9UMQ6 739 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 SLC8A2Q9UPR5 921 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 SCML2Q9UQR0 700 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 SH3BP1Q9Y3L3 701 aa17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
PRPF40A-204ENST00000450303 A0A1W2PQH9 124 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 E2F8A0AVK6 867 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 SLC9A3R1O14745 358 aaPredicted RBP17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 MDM4O15151 490 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 ATG13O75143 517 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 CCDC172P0C7W6 258 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 STAT1P42224 750 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 TUBP50607 506 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 SEC13P55735 322 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 ZBED6P86452 979 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 APBA1Q02410 837 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 DRAP1Q14919 205 aaPredicted RBP17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 GJB7Q6PEY0 223 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 LONP2Q86WA8 852 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 CNGA4Q8IV77 575 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 SPC24Q8NBT2 197 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 NAA15Q9BXJ9 866 aaKnown RBP17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 KIAA1549LQ6ZVL6 1849 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 ZNF292O60281 2723 aa17.9■□□□□ 0.46
PRPF40A-204ENST00000450303 AKR1B15C9JRZ8 316 aaPredicted RBP17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 CASP14P31944 242 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 KIF11P52732 1056 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 SIM2Q14190 667 aaPredicted RBP17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 FBXO43Q4G163 708 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 LY6G5CQ5SRR4 150 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 C12orf40Q86WS4 652 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 SFTPA1Q8IWL2 248 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 BBS7Q8IWZ6 715 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 KLF16Q9BXK1 252 aaPredicted RBP17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 TTYH3Q9C0H2 523 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 TBC1D14Q9P2M4 693 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 RAB23Q9ULC3 237 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 PCDHB4Q9Y5E5 795 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 SPTBN4Q9H254 2564 aa17.89■□□□□ 0.45
PRPF40A-204ENST00000450303 K7EQS6 105 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 EPHB6O15197 1021 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 GYPCP04921 128 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 ADH5P11766 374 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 RARGP13631 454 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 KRT5P13647 590 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 KRT9P35527 623 aa17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 ATP5C1P36542 298 aaKnown RBP17.88■□□□□ 0.45
PRPF40A-204ENST00000450303 USP8P40818 1118 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms