RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 C11orf74Q86VG3 221 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 GRIN3AQ8TCU5 1115 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 RPGRQ92834 1020 aaKnown RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 ATP2A3Q93084 1043 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 FBXL8Q96CD0 374 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 RMND5BQ96G75 393 aaPredicted RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 WRNIP1Q96S55 665 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 KCNK16Q96T55 309 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 RUSC1Q9BVN2 902 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 NYXQ9GZU5 481 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ZNF395Q9H8N7 513 aaPredicted RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 SIAEQ9HAT2 523 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 UBE2TQ9NPD8 197 aaPredicted RBP8.92□□□□□ -0.98
LSM5-208ENST00000450169 VPS51Q9UID3 782 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ANAPC7Q9UJX3 599 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 SHOC2Q9UQ13 582 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 N6AMT1Q9Y5N5 214 aa8.92□□□□□ -0.98
LSM5-208ENST00000450169 ITGB4P16144 1822 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 IQANK1A0A1B0GTG1 560 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 CCDC195A0A1B0GUA6 201 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 GOLGA8SH3BPF8 625 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 GOLGA8MH3BSY2 632 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 TGFB1I1O43294 461 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 ATE1O95260 518 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 BMP10O95393 424 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 SGPL1O95470 568 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 POLR2EP19388 210 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 TNNI2P48788 182 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 BMXP51813 675 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 PEX3P56589 373 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 SLC18A2Q05940 514 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 WASHC5Q12768 1159 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 E2F2Q14209 437 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 CHI3L2Q15782 390 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 SLC15A2Q16348 729 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 ZBED5Q49AG3 693 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 TEX44Q53QW1 395 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 RNASEH2BQ5TBB1 312 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 PPP1R2P3Q6NXS1 205 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 ZFP1Q6P2D0 407 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 MCF2L2Q86YR7 1114 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 FERMT1Q9BQL6 677 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 SHCBP1LQ9BZQ2 653 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 COPS7BQ9H9Q2 264 aaPredicted RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 CLK4Q9HAZ1 481 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 EPS15L1Q9UBC2 864 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 NOCTQ9UK39 431 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 CDC14AQ9UNH5 594 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 B3GNT3Q9Y2A9 372 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 TNS2Q63HR2 1409 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 ARHGEF37A1IGU5 675 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 NOTOA8MTQ0 251 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 COPEO14579 308 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 APOEP02649 317 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 NELFEP18615 380 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 ADCY7P51828 1080 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 MRPS22P82650 360 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 TXNL4AP83876 142 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 CES4AQ5XG92 561 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 LMBRD2Q68DH5 695 aaPredicted RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 CIAPIN1Q6FI81 312 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 PLEKHA7Q6IQ23 1121 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 KRT80Q6KB66 452 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 POTEGQ6S5H5 508 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 ZNF34Q8IZ26 560 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 HM13Q8TCT9 377 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 TRUB1Q8WWH5 349 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 HPS1Q92902 700 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 NACC2Q96BF6 587 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 CMTM5Q96DZ9 223 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 PIGSQ96S52 555 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 VAT1LQ9HCJ6 419 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 PNPLA3Q9NST1 481 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 SACM1LQ9NTJ5 587 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 TRMT112Q9UI30 125 aaKnown RBP8.91□□□□□ -0.98
LSM5-208ENST00000450169 RABL2BQ9UNT1 228 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 IKBKGQ9Y6K9 419 aa8.91□□□□□ -0.98
LSM5-208ENST00000450169 A0A0B4J269 797 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 A0A1W2PQ67 120 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 TRIM64CA6NLI5 447 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 ERVV-2B6SEH9 535 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 H3BMQ9 156 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 KPNA4O00629 521 aaPredicted RBP8.9□□□□□ -0.98
LSM5-208ENST00000450169 GIPC1O14908 333 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 FAM189A1O60320 539 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 PRMT3O60678 531 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 ETS1P14921 441 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 MZF1P28698 734 aaPredicted RBP8.9□□□□□ -0.98
LSM5-208ENST00000450169 IREB2P48200 963 aaKnown RBP8.9□□□□□ -0.98
LSM5-208ENST00000450169 MXI1P50539 228 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 HNRNPFP52597 415 aaKnown RBP8.9□□□□□ -0.98
LSM5-208ENST00000450169 ITGADQ13349 1161 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 TUBB3Q13509 450 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 DOK7Q18PE1 504 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 SBK1Q52WX2 424 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 SH2D5Q6ZV89 423 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 CYP2U1Q7Z449 544 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 SETD3Q86TU7 594 aaPredicted RBP8.9□□□□□ -0.98
LSM5-208ENST00000450169 CARM1Q86X55 608 aa8.9□□□□□ -0.98
LSM5-208ENST00000450169 ARHGEF19Q8IW93 802 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms