RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 ELL3Q9HB65 397 aaPredicted RBP11.16□□□□□ -0.62
SCN5A-208ENST00000450102 NEK6Q9HC98 313 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 SAE1Q9UBE0 346 aaPredicted RBP11.16□□□□□ -0.62
SCN5A-208ENST00000450102 PTPRTO14522 1441 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 KATNA1O75449 491 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 MAP3K6O95382 1288 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 IGFBP4P22692 258 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 OVGP1Q12889 678 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 PMF1Q6P1K2 205 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 SLFN11Q7Z7L1 901 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 CACUL1Q86Y37 369 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 LEMD2Q8NC56 503 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 TARS2Q9BW92 718 aaKnown RBP11.16□□□□□ -0.62
SCN5A-208ENST00000450102 ZNF70Q9UC06 446 aaPredicted RBP11.16□□□□□ -0.62
SCN5A-208ENST00000450102 ZNF112Q9UJU3 913 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 SF3B1O75533 1304 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCN5A-208ENST00000450102 FOXN1O15353 648 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 RHOBTB3O94955 611 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 UQCRBP14927 111 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 VHLP40337 213 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 OTUD4Q01804 1114 aaKnown RBP11.16□□□□□ -0.62
SCN5A-208ENST00000450102 NAB2Q15742 525 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 BNC2Q6ZN30 1099 aaPredicted RBP11.16□□□□□ -0.62
SCN5A-208ENST00000450102 ZNF671Q8TAW3 534 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 FAM153AQ9UHL3 310 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 AXIN2Q9Y2T1 843 aa11.16□□□□□ -0.62
SCN5A-208ENST00000450102 MTA2O94776 668 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 BAIAP3O94812 1187 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 SCNN1BP51168 640 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 RAD23AP54725 363 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 ZNF543Q08ER8 600 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 SEL1L3Q68CR1 1132 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 ACOT1Q86TX2 421 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 TERB1Q8NA31 727 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 MDM1Q8TC05 714 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 FIG4Q92562 907 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 DPY30Q9C005 99 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 SOHLH2Q9NX45 425 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 IGSF1Q8N6C5 1336 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 NDUFS2O75306 463 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 GARTP22102 1010 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 TSNQ15631 228 aaKnown RBP11.15□□□□□ -0.62
SCN5A-208ENST00000450102 PLEKHA7Q6IQ23 1121 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.15□□□□□ -0.62
SCN5A-208ENST00000450102 LRRC49Q8IUZ0 686 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 ADGRF2Q8IZF7 708 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 SRBD1Q8N5C6 995 aaKnown RBP11.15□□□□□ -0.62
SCN5A-208ENST00000450102 LRRC39Q96DD0 335 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 MXRA8Q9BRK3 442 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 GPAMQ9HCL2 828 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 BATF3Q9NR55 127 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 MBD2Q9UBB5 411 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 SDR42E2A6NKP2 422 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 TARSP26639 723 aaKnown RBP11.15□□□□□ -0.62
SCN5A-208ENST00000450102 GSSP48637 474 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 CSHL1Q14406 222 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 FNDC3BQ53EP0 1204 aaKnown RBP11.15□□□□□ -0.62
SCN5A-208ENST00000450102 IKBIPQ70UQ0 350 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 PTAR1Q7Z6K3 402 aaPredicted RBP11.15□□□□□ -0.62
SCN5A-208ENST00000450102 ZCCHC2Q9C0B9 1178 aaKnown RBP11.15□□□□□ -0.62
SCN5A-208ENST00000450102 CNGB3Q9NQW8 809 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 DSEQ9UL01 958 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 PRR12Q9ULL5 1215 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 FLT1P17948 1338 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 MAST1Q9Y2H9 1570 aa11.15□□□□□ -0.62
SCN5A-208ENST00000450102 F9P00740 461 aa11.15□□□□□ -0.63
SCN5A-208ENST00000450102 PTSQ03393 145 aa11.15□□□□□ -0.63
SCN5A-208ENST00000450102 RPTNQ6XPR3 784 aa11.15□□□□□ -0.63
SCN5A-208ENST00000450102 PROSER1Q86XN7 944 aa11.15□□□□□ -0.63
SCN5A-208ENST00000450102 MB21D2Q8IYB1 491 aaPredicted RBP11.15□□□□□ -0.63
SCN5A-208ENST00000450102 LPCAT1Q8NF37 534 aa11.15□□□□□ -0.63
SCN5A-208ENST00000450102 LRRC40Q9H9A6 602 aa11.15□□□□□ -0.63
SCN5A-208ENST00000450102 MTMR4Q9NYA4 1195 aa11.15□□□□□ -0.63
SCN5A-208ENST00000450102 GSG1L2A8MUP6 293 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 IGF2BP3O00425 579 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCN5A-208ENST00000450102 KRT6AP02538 564 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 KRT6BP04259 564 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 MUTP22033 750 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 IFNGR2P38484 337 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 KRT6CP48668 564 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 GTF2A2P52657 109 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 ALG11Q2TAA5 492 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 TRIM9Q9C026 710 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 ANKARQ7Z5J8 1434 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 IQCMA0A1B0GVH7 501 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 BCLAF3A2AJT9 711 aaKnown RBP11.14□□□□□ -0.63
SCN5A-208ENST00000450102 MFN2O95140 757 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 RBP1P09455 135 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 DNAJC3Q13217 504 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 XRCC4Q13426 336 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 BOP1Q14137 746 aaKnown RBP11.14□□□□□ -0.63
SCN5A-208ENST00000450102 MTF1Q14872 753 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 ZNF280DQ6N043 979 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 FOXR1Q6PIV2 292 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 BARGINQ6ZT62 677 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 ANKRD13AQ8IZ07 590 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 APOL2Q9BQE5 337 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 NCAPD2Q15021 1401 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 A0A088AWK7 358 aa11.14□□□□□ -0.63
SCN5A-208ENST00000450102 IFNA16P05015 189 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms