RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 ARID3BQ8IVW6 561 aaPredicted RBP8.44□□□□□ -1.06
LINC00954-202ENST00000449086 PALM2Q8IXS6 379 aa8.44□□□□□ -1.06
LINC00954-202ENST00000449086 LMO3Q8TAP4 145 aa8.44□□□□□ -1.06
LINC00954-202ENST00000449086 SLCO2A1Q92959 643 aa8.44□□□□□ -1.06
LINC00954-202ENST00000449086 PPP2R3CQ969Q6 453 aa8.44□□□□□ -1.06
LINC00954-202ENST00000449086 KREMEN1Q96MU8 473 aa8.44□□□□□ -1.06
LINC00954-202ENST00000449086 PANX3Q96QZ0 392 aa8.44□□□□□ -1.06
LINC00954-202ENST00000449086 SENP6Q9GZR1 1112 aaPredicted RBP8.44□□□□□ -1.06
LINC00954-202ENST00000449086 CYP4F11Q9HBI6 524 aa8.44□□□□□ -1.06
LINC00954-202ENST00000449086 SEPT9Q9UHD8 586 aaPredicted RBP8.44□□□□□ -1.06
LINC00954-202ENST00000449086 NOCTQ9UK39 431 aaKnown RBP8.44□□□□□ -1.06
LINC00954-202ENST00000449086 MTO1Q9Y2Z2 717 aaKnown RBP8.44□□□□□ -1.06
LINC00954-202ENST00000449086 SMIM35A0A1B0GVV1 85 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 A8MXQ7 604 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 EIF3DO15371 548 aaKnown RBP eCLIP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 MAFO75444 373 aaPredicted RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 CYP1A2P05177 515 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 RARRES1P49788 294 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 MFAP3P55082 362 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 GEMIN4P57678 1058 aaKnown RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 GAD2Q05329 585 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 LSAMPQ13449 338 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 BBS9Q3SYG4 887 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 SDCCAG8Q86SQ7 713 aaPredicted RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PRPF39Q86UA1 669 aaKnown RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 RHPN2Q8IUC4 686 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 FAM126BQ8IXS8 530 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 ULK2Q8IYT8 1036 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 LINC01465Q8N7H1 131 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 SHKBP1Q8TBC3 707 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 VTI1AQ96AJ9 217 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PLEKHG4BQ96PX9 1271 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PHF12Q96QT6 1004 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PAFAH2Q99487 392 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 C11orf70Q9BRQ4 267 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 TMEM121Q9BTD3 319 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PI4K2AQ9BTU6 479 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 DHX33Q9H6R0 707 aaKnown RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 SLC7A8Q9UHI5 535 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 ARHGEF35A5YM69 484 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 CCDC85CA6NKD9 419 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 SPECC1L-ADORA2AF8WAN1 911 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 C22orf31O95567 290 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 TRIP10Q15642 601 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PABPC1LQ4VXU2 614 aaKnown RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 SH2D4BQ5SQS7 431 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 SERINC5Q86VE9 423 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 TMPRSS6Q8IU80 811 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PIP4P2Q8N4L2 257 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 MCPH1Q8NEM0 835 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 OR6Y1Q8NGX8 325 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 MIPOL1Q8TD10 442 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 DIS3LQ8TF46 1054 aaKnown RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PRPF31Q8WWY3 499 aaKnown RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 CEP170P1Q96L14 293 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 MIS12Q9H081 205 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 ZNF395Q9H8N7 513 aaPredicted RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 CYLDQ9NQC7 956 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PDLIM7Q9NR12 457 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 DNALI1O14645 258 aaPredicted RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PARNO95453 639 aaKnown RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 ITGA2BP08514 1039 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 IMPDH2P12268 514 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 RFX1P22670 979 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 MAGEA10P43363 369 aaPredicted RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 NSFP46459 744 aaKnown RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 TAS2R40P59535 323 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 IRX4P78413 519 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 TMPRSS15P98073 1019 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 TMEM62Q0P6H9 643 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 DLG1Q12959 904 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 CCNG2Q16589 344 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 HIF1AQ16665 826 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 MARCH8Q5T0T0 291 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 TREML1Q86YW5 311 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 DAW1Q8N136 415 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 EFCAB3Q8N7B9 438 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 PIP4K2CQ8TBX8 421 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 SLC7A3Q8WY07 619 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 ACAP3Q96P50 834 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 MECRQ9BV79 373 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 SAE1Q9UBE0 346 aaPredicted RBP8.43□□□□□ -1.06
LINC00954-202ENST00000449086 TMCO1Q9UM00 188 aa8.43□□□□□ -1.06
LINC00954-202ENST00000449086 I3L4J1 428 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 PITPNM1O00562 1244 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 PDE5AO76074 875 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 ABHD2P08910 425 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 AQP4P55087 323 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 CENPCQ03188 943 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 NCOA4Q13772 614 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 XKR9Q5GH70 373 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 ACAD10Q6JQN1 1059 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 RBM44Q6ZP01 1051 aaKnown RBP8.42□□□□□ -1.06
LINC00954-202ENST00000449086 ANKS1BQ7Z6G8 1248 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 RSPH3Q86UC2 560 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 MAP7D3Q8IWC1 876 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 CTAGE3PQ8IX95 158 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 FAM71AQ8IYT1 594 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 POU5F2Q8N7G0 328 aa8.42□□□□□ -1.06
LINC00954-202ENST00000449086 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms