RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 SEC16BQ96JE7 1060 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 TBCBQ99426 244 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CAPN10Q9HC96 672 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 A1CFQ9NQ94 594 aaKnown RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 PXDNQ92626 1479 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 PRLRP16471 622 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 GPC1P35052 558 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 SGCGQ13326 291 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CCDC85BQ15834 202 aaPredicted RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 ILDR2Q71H61 639 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 NLRP9Q7RTR0 991 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 BRSK2Q8IWQ3 736 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 C3orf20Q8ND61 904 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CYP2W1Q8TAV3 490 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 JADE3Q92613 823 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 FAM111AQ96PZ2 611 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 FRMPD4Q14CM0 1322 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 FER1L4A9Z1Z3 1794 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 DGKIO75912 1065 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 PAEPP09466 180 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 ILF2Q12905 390 aaKnown RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 TMEM119Q4V9L6 283 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 LAYNQ6UX15 382 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 SUGP1Q8IWZ8 645 aaKnown RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 TMEM86AQ8N2M4 240 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 FBXL16Q8N461 479 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CSGALNACT1Q8TDX6 532 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 KAT2BQ92831 832 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 NSL1Q96IY1 281 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 OSBPL1AQ9BXW6 950 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 PABPC3Q9H361 631 aaKnown RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 OSGEPL1Q9H4B0 414 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CCDC134Q9H6E4 229 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 WDR41Q9HAD4 459 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 ZBTB39O15060 712 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 TCN1P20061 433 aaPredicted RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 MSH3P20585 1137 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 HSD17B3P37058 310 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 TRPM8Q7Z2W7 1104 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 ZNF571Q7Z3V5 609 aaPredicted RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 STRA8Q7Z7C7 330 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 LZTR1Q8N653 840 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 ACTRT1Q8TDG2 376 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CYGBQ8WWM9 190 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 PACSIN1Q9BY11 444 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 KRCC1Q9NPI7 259 aaPredicted RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 MROH7Q68CQ1 1323 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 TOMM70O94826 608 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CYP3A4P08684 503 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 DARSP14868 501 aaKnown RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 OR1E1P30953 314 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 SOX11P35716 441 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CHI3L1P36222 383 aaPredicted RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 YWHAZP63104 245 aaKnown RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 BTN2A2Q8WVV5 523 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 ZNF606Q8WXB4 792 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CASKIN2Q8WXE0 1202 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 PGLYRP2Q96PD5 576 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 TINF2Q9BSI4 451 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 THUMPD3Q9BV44 507 aaKnown RBP10.5□□□□□ -0.73
SCN10A-201ENST00000449082 DCLK3Q9C098 648 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 GPRC5DQ9NZD1 345 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 NR2E3Q9Y5X4 410 aa10.5□□□□□ -0.73
SCN10A-201ENST00000449082 CENPAP49450 140 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 DSG4Q86SJ6 1040 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 MCOLN2Q8IZK6 566 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 LPCAT1Q8NF37 534 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 DTX3LQ8TDB6 740 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 DIS3LQ8TF46 1054 aaKnown RBP10.49□□□□□ -0.73
SCN10A-201ENST00000449082 TMEM121Q9BTD3 319 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 ATP13A1Q9HD20 1204 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 KLC4Q9NSK0 619 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 NRCAMQ92823 1304 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 RBAK-RBAKDNI3L0D1 243 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 TSPAN3O60637 253 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 CAND2O75155 1236 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 TUBP50607 506 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 GCNT1Q02742 428 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 CELF3Q5SZQ8 465 aaKnown RBP10.49□□□□□ -0.73
SCN10A-201ENST00000449082 VCPIP1Q96JH7 1222 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 ADAM2Q99965 735 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 APOL2Q9BQE5 337 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 SENP6Q9GZR1 1112 aaPredicted RBP10.49□□□□□ -0.73
SCN10A-201ENST00000449082 VANGL2Q9ULK5 521 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 PNMA8BQ9ULN7 279 aaPredicted RBP10.49□□□□□ -0.73
SCN10A-201ENST00000449082 RAD54BQ9Y620 910 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 KRT8P05787 483 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 BEX3Q00994 111 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 C11orf63Q6NUN7 778 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 ARID3BQ8IVW6 561 aaPredicted RBP10.49□□□□□ -0.73
SCN10A-201ENST00000449082 ZNF513Q8N8E2 541 aaPredicted RBP10.49□□□□□ -0.73
SCN10A-201ENST00000449082 NCKAP1Q9Y2A7 1128 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 SLC15A5A6NIM6 579 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 ACTN3Q08043 901 aaPredicted RBP10.49□□□□□ -0.73
SCN10A-201ENST00000449082 SLC39A12Q504Y0 691 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 KRT78Q8N1N4 520 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 NOA1Q8NC60 698 aaKnown RBP10.49□□□□□ -0.73
SCN10A-201ENST00000449082 SKA1Q96BD8 255 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 CAMKK2Q96RR4 588 aa10.49□□□□□ -0.73
SCN10A-201ENST00000449082 ZCCHC2Q9C0B9 1178 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms