RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 CYP4F8P98187 520 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 CYP4A11Q02928 519 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 PLD1Q13393 1074 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SF3A1Q15459 793 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 MCMDC2Q4G0Z9 681 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 XKR3Q5GH77 459 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 HP1BP3Q5SSJ5 553 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 SLC27A1Q6PCB7 646 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 DNAJB7Q7Z6W7 309 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZC3H18Q86VM9 953 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 SGMS1Q86VZ5 419 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SFTPA1Q8IWL2 248 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 FTSJ3Q8IY81 847 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 SRRM1Q8IYB3 904 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 OSCP1Q8WVF1 389 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 PRPF31Q8WWY3 499 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 CCDC74AQ96AQ1 378 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 FAM227BQ96M60 508 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZNF577Q9BSK1 485 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ANO3Q9BYT9 981 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 TRIM6Q9C030 488 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 ASCL3Q9NQ33 180 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 PARP2Q9UGN5 583 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZC3H7BQ9UGR2 993 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 ASB3Q9Y575 518 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 A0A1B0GUA9 196 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 WIPF3A6NGB9 483 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 H7C4K7 107 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 EIF1AYO14602 144 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 BCAT2O15382 392 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 PPFIA2O75334 1257 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 NPTXRO95502 500 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 FOSP01100 380 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 CYP3A4P08684 503 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 FAM87AP0C7U9 286 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 GLDCP23378 1020 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 CASRP41180 1078 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 EPHB3P54753 998 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 INHBCP55103 352 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 PTENP60484 403 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 MESP2Q0VG99 397 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 LAMTOR4Q0VGL1 99 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 DNAJC3Q13217 504 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ZNF268Q14587 947 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 CCDC81Q6ZN84 652 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 LSMEM2Q8N112 164 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 ATP2A3Q93084 1043 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 WDR89Q96FK6 387 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 JPH2Q9BR39 696 aaPredicted RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 KRT23Q9C075 422 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SLC25A18Q9H1K4 315 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 TDP1Q9NUW8 608 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SEC63Q9UGP8 760 aaKnown RBP3.57□□□□□ -1.84
PMS1-215ENST00000447232 AP4E1Q9UPM8 1137 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 CLCA2Q9UQC9 943 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 SAMM50Q9Y512 469 aa3.57□□□□□ -1.84
PMS1-215ENST00000447232 LRRK1Q38SD2 2015 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 ANKHD1Q8IWZ3 2542 aaKnown RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 TRIP11Q15643 1979 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 SVILO95425 2214 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CSMD2Q7Z408 3487 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 TMEM238LA0A1B0GVL6 79 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 A0A1B0GVT2 93 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 A0A1W2PQF6 199 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CBX4O00257 560 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CDC25CP30307 473 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CCT8P50990 548 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 OXCT1P55809 520 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 SETQ01105 290 aaPredicted RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 MBTD1Q05BQ5 628 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 ILKQ13418 452 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 MTF1Q14872 753 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 KIF19Q2TAC6 998 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CTXN3Q4LDR2 81 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 EMC10Q5UCC4 262 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 C1QL3Q5VWW1 255 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CC2D1AQ6P1N0 951 aaPredicted RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 ANO5Q75V66 913 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CYB5R4Q7L1T6 521 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 TMEM150AQ86TG1 271 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 RNF149Q8NC42 400 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 PSPC1Q8WXF1 523 aaKnown RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 EXTL1Q92935 676 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 IGSF8Q969P0 613 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 LENG9Q96B70 501 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 FAM20AQ96MK3 541 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 PPP1R10Q96QC0 940 aaKnown RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 MAP3K14Q99558 947 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 NIF3L1Q9GZT8 377 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 DHX33Q9H6R0 707 aaKnown RBP3.56□□□□□ -1.84
PMS1-215ENST00000447232 CD93Q9NPY3 652 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 CYP8B1Q9UNU6 501 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 PCDHB1Q9Y5F3 818 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 NIPBLQ6KC79 2804 aaeCLIP3.56□□□□□ -1.84
PMS1-215ENST00000447232 E2F8A0AVK6 867 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 TBX3O15119 743 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 ASAP2O43150 1006 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 B4GALT5O43286 388 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 MARCH6O60337 910 aa3.56□□□□□ -1.84
PMS1-215ENST00000447232 MPOP05164 745 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms