RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 CDC25AP30304 524 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 DDIT3P35638 169 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 NPTX2P47972 431 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 NASPP49321 788 aaPredicted RBP8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 PEX3P56589 373 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 DSC1Q08554 894 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 HYAL1Q12794 435 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 GRIK3Q13003 919 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 MAPK7Q13164 816 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 SMC1AQ14683 1233 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 MROH9Q5TGP6 573 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 CRIP3Q6Q6R5 217 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 TMEM184AQ6ZMB5 413 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 MAEAQ7L5Y9 396 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 KCNK18Q7Z418 384 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 DAW1Q8N136 415 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 MRPL43Q8N983 215 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 MICAL1Q8TDZ2 1067 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 IGSF21Q96ID5 467 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 CPB2Q96IY4 423 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 EIF2AQ9BY44 585 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 MRPL4Q9BYD3 311 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 NRDE2Q9H7Z3 1164 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 TLE6Q9H808 572 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 KMT5AQ9NQR1 393 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 SEL1LQ9UBV2 794 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 VCANP13611 3396 aa8.47□□□□□ -1.05
SMARCE1-206ENST00000447024 A0A087WWV3 80 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 CCDC169A6NNP5 214 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 B4GALT5O43286 388 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 PPP6R2O75170 966 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 SLPIP03973 132 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 CTSAP10619 480 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 KCNA5P22460 613 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 ZNF131P52739 623 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 HMGA2P52926 109 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 CYP4F3Q08477 520 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 STRN3Q13033 797 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 COASYQ13057 564 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 DUSP6Q16828 381 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 ATF7IP2Q5U623 682 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 GTF2IRD2BQ6EKJ0 949 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 CCDC73Q6ZRK6 1079 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 GTF2IRD2Q86UP8 949 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 Q8N1Y9 231 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 RASSF8Q8NHQ8 419 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 FRS2Q8WU20 508 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 LARP4BQ92615 738 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 RAD54LQ92698 747 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 LPPQ93052 612 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 SHDQ96IW2 340 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 ZSWIM3Q96MP5 696 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 RPS6KC1Q96S38 1066 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 TSPAN18Q96SJ8 248 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 UHRF1Q96T88 793 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 ACO2Q99798 780 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 TCF25Q9BQ70 676 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 COLEC11Q9BWP8 271 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 LRRC27Q9C0I9 530 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 CUEDC2Q9H467 287 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 NXF3Q9H4D5 531 aaKnown RBP8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 PDZD7Q9H5P4 517 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 PARVGQ9HBI0 331 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 ENTPD7Q9NQZ7 604 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 TOPORSQ9NS56 1045 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 CLDND1Q9NY35 253 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 DPP7Q9UHL4 492 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 FBXO2Q9UK22 296 aaPredicted RBP8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 CFAP45Q9UL16 551 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 INPP5FQ9Y2H2 1132 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 CLIC4Q9Y696 253 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 PLXNA4Q9HCM2 1894 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 REV3LO60673 3130 aa8.46□□□□□ -1.06
SMARCE1-206ENST00000447024 TDRD15B5MCY1 1934 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 NRP1O14786 923 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 TOM1L1O75674 476 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 NPTXRO95502 500 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 CYP1A1P04798 512 aaPredicted RBP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 SSBP05455 408 aaKnown RBP eCLIP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 THP07101 528 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 MCF2P10911 925 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 MLH1P40692 756 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 NRIP1P48552 1158 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 SLC11A1P49279 550 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 RPL11P62913 178 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 POU5F1Q01860 360 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 CREMQ03060 361 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 TFF2Q03403 129 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 ELAVL2Q12926 359 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 ZRSR1Q15695 479 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 RRAGBQ5VZM2 374 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 GPBP1Q86WP2 473 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 ZNF280BQ86YH2 543 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 TRIM59Q8IWR1 403 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 COLGALT2Q8IYK4 626 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 VPS52Q8N1B4 723 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 LINC00301Q8NCQ3 95 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 SMRP1Q8NCR6 262 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 TMEM161BQ8NDZ6 487 aa8.45□□□□□ -1.06
SMARCE1-206ENST00000447024 KCNG4Q8TDN1 519 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms