RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 KCNK1O00180 336 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 FKBP6O75344 327 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 GMNNO75496 209 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 ERVK-10P10266 1014 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 ALADP13716 330 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 GMPRP36959 345 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 ADARP55265 1226 aaKnown RBP12.46□□□□□ -0.41
APLF-203ENST00000445692 STX1BP61266 288 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 USP10Q14694 798 aaKnown RBP12.46□□□□□ -0.41
APLF-203ENST00000445692 NFIL3Q16649 462 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 SNX31Q8N9S9 440 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 TMC2Q8TDI7 906 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 DMAC2Q9NW81 257 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 WDR35Q9P2L0 1181 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 SBF2Q86WG5 1849 aa12.46□□□□□ -0.41
APLF-203ENST00000445692 A8MXQ7 604 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 KPNA7A9QM74 516 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 NPTXRO95502 500 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 TMEM62Q0P6H9 643 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 ACVR2BQ13705 512 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 PLEKHG4Q58EX7 1191 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 SPATA6LQ8N4H0 392 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 AFAP1L2Q8N4X5 818 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 GMCL1Q96IK5 515 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 MRPL4Q9BYD3 311 aaKnown RBP12.46□□□□□ -0.42
APLF-203ENST00000445692 WDR55Q9H6Y2 383 aaPredicted RBP12.46□□□□□ -0.42
APLF-203ENST00000445692 BFARQ9NZS9 450 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 RABGEF1Q9UJ41 708 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 TDRKHQ9Y2W6 561 aaKnown RBP12.46□□□□□ -0.42
APLF-203ENST00000445692 KCPQ6ZWJ8 1503 aa12.46□□□□□ -0.42
APLF-203ENST00000445692 CST3P01034 146 aaPredicted RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 KDELR1P24390 212 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 HDAC4P56524 1084 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 FOLH1Q04609 750 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 CYP1B1Q16678 543 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 ZC3H12AQ5D1E8 599 aaKnown RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 GLRA4Q5JXX5 417 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 SPDYAQ5MJ70 313 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 MTHFD1LQ6UB35 978 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 GADL1Q6ZQY3 521 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 UNC5BQ8IZJ1 945 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 NLGN1Q8N2Q7 840 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 PREBQ9HCU5 417 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 LGALS13Q9UHV8 139 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 LRRC42Q9Y546 428 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 SNED1Q8TER0 1413 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 TUBGCP6Q96RT7 1819 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 ROBO3Q96MS0 1386 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 IGLV3-22A0A075B6J6 115 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 VIL1P09327 827 aaKnown RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 GPD1P21695 349 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 MGAT1P26572 445 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 C1QBPQ07021 282 aaKnown RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 XKR3Q5GH77 459 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 PPM1JQ5JR12 505 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 TRMT10BQ6PF06 316 aaKnown RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 FAM172AQ8WUF8 416 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 LRRC4Q9HBW1 653 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 GAKO14976 1311 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 ZNF536O15090 1300 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 T-ENOLP0DO92 83 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 PSMC3P17980 439 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 PLK1P53350 603 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 TSPY1Q01534 308 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 FOXR2Q6PJQ5 311 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 LPCAT2Q7L5N7 544 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 MAP4K3Q8IVH8 894 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 PPP1R13LQ8WUF5 828 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 TRAPPC12Q8WVT3 735 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 FAM163AQ96GL9 167 aaPredicted RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 PAIP1Q9H074 479 aaKnown RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 GOLGA4Q13439 2230 aaKnown RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 CNTNAP2Q9UHC6 1331 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 MYH3P11055 1940 aa12.45□□□□□ -0.42
APLF-203ENST00000445692 MYO5AQ9Y4I1 1855 aaKnown RBP12.45□□□□□ -0.42
APLF-203ENST00000445692 ARHGEF37A1IGU5 675 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 PRPF4O43172 522 aaKnown RBP eCLIP12.44□□□□□ -0.42
APLF-203ENST00000445692 CPA3P15088 417 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 EPHA3P29320 983 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 ALDH1A3P47895 512 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 GPX6P59796 221 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 GTF2BQ00403 316 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 CCDC15Q0P6D6 951 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 PDK1Q15118 436 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 RNASEH2BQ5TBB1 312 aaKnown RBP12.44□□□□□ -0.42
APLF-203ENST00000445692 RSBN1LQ6PCB5 846 aaPredicted RBP12.44□□□□□ -0.42
APLF-203ENST00000445692 TREML1Q86YW5 311 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 SLC9A9Q8IVB4 645 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 SCUBE3Q8IX30 993 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 MASTLQ96GX5 879 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 PDCD2LQ9BRP1 358 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 ING2Q9H160 280 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 DMAP1Q9NPF5 467 aaPredicted RBP12.44□□□□□ -0.42
APLF-203ENST00000445692 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 C15orf38-AP3S2A0A0A6YYH1 394 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 TPP1O14773 563 aa12.44□□□□□ -0.42
APLF-203ENST00000445692 LIN7AO14910 233 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms