RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 F5P12259 2224 aa18.28■□□□□ 0.52
SMARCAL1-209ENST00000444508 FAM170BA6NMN3 283 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 NCAM2O15394 837 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 LTFP02788 710 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 CTHP32929 405 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 UBASH3AP57075 661 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 NR1I3Q14994 352 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 FMNL3Q8IVF7 1028 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 WDTC1Q8N5D0 677 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 TMEM105Q8N8V8 129 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 EPS8L1Q8TE68 723 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 IPO4Q8TEX9 1081 aaKnown RBP18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 EXOC4Q96A65 974 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 FAM149B1Q96BN6 582 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 OSBPL6Q9BZF3 934 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 NDRG2Q9UN36 371 aaKnown RBP18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 HCN4Q9Y3Q4 1203 aa18.27■□□□□ 0.52
SMARCAL1-209ENST00000444508 KMT2EQ8IZD2 1858 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 MIA3Q5JRA6 1907 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 SLC12A8A0AV02 714 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 PI15O43692 258 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 LSM8O95777 96 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 CCDC172P0C7W6 258 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 TARSP26639 723 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 CDR2Q01850 454 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 HTR3DQ70Z44 454 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 CCDC105Q8IYK2 499 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 MSANTD4Q8NCY6 345 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 DDX1Q92499 740 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 CPXM1Q96SM3 734 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 DCLK3Q9C098 648 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 NOCTQ9UK39 431 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 ZNF318Q5VUA4 2279 aa18.26■□□□□ 0.51
SMARCAL1-209ENST00000444508 OTOL1A6NHN0 477 aaPredicted RBP18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 PAPSS1O43252 624 aaPredicted RBP18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 STC2O76061 302 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 ADH1CP00326 375 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 TPM3P06753 285 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 DCNP07585 359 aaKnown RBP18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 HMBSP08397 361 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 MMEP08473 750 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 GJA4P35212 333 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 NUBP1P53384 320 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 ARID5AQ03989 594 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 BBS7Q8IWZ6 715 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 ADGRG2Q8IZP9 1017 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 WBP2Q969T9 261 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 MYO6Q9UM54 1294 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 ZNF510Q9Y2H8 683 aa18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 HBS1LQ9Y450 684 aaKnown RBP18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 MTF2Q9Y483 593 aaPredicted RBP18.25■□□□□ 0.51
SMARCAL1-209ENST00000444508 SHISA7A6NL88 538 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 CAPN9O14815 690 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 CYP17A1P05093 508 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 NCAM1P13591 858 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 FERP16591 822 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 CDH5P33151 784 aaPredicted RBP18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 MAGEA9P43362 315 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 ZNF445P59923 1031 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 PON2Q15165 354 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 DHCR24Q15392 516 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 PTPN20Q4JDL3 420 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 OR6B2Q6IFH4 312 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 MSANTD2Q6P1R3 559 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 TXNDC11Q6PKC3 985 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 TOGARAM2Q6ZUX3 1019 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 RNF214Q8ND24 703 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 SLC20A1Q8WUM9 679 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 PLD4Q96BZ4 506 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 PRRX2Q99811 253 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 POPDC2Q9HBU9 364 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 IFNKQ9P0W0 207 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 TJP2Q9UDY2 1190 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 SFMBT1Q9UHJ3 866 aa18.24■□□□□ 0.51
SMARCAL1-209ENST00000444508 GREM1O60565 184 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 ERBB2P04626 1255 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 ADH5P11766 374 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 COL9A1P20849 921 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 CORO1AP31146 461 aaKnown RBP18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 YWHAZP63104 245 aaKnown RBP18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 GRSF1Q12849 480 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 LRRC32Q14392 662 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 EFHC1Q5JVL4 640 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 TRIM72Q6ZMU5 477 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 BEND5Q7L4P6 421 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 ERICH1Q86X53 443 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 ZDHHC17Q8IUH5 632 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 P2RY13Q9BPV8 354 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 NUP58Q9BVL2 599 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 EDEM3Q9BZQ6 932 aa18.23■□□□□ 0.51
SMARCAL1-209ENST00000444508 TRDMT1O14717 391 aaKnown RBP18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 CBFA2T2O43439 604 aa18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 HSF2BPO75031 334 aa18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 GLI1P08151 1106 aa18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 RPS9P46781 194 aaKnown RBP18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 HARS2P49590 506 aaKnown RBP18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 NOMO3P69849 1222 aa18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 FMO1Q01740 532 aa18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 GAD2Q05329 585 aa18.22■□□□□ 0.51
SMARCAL1-209ENST00000444508 DGKKQ5KSL6 1271 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms