RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 MESP2Q0VG99 397 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 CACNA2D4Q7Z3S7 1137 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 SFTPA1Q8IWL2 248 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 FAM160A2Q8N612 972 aaPredicted RBP21.07■□□□□ 0.96
LRCH3-208ENST00000443727 ALLCQ8N6M5 410 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 LMO3Q8TAP4 145 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 XPO6Q96QU8 1125 aaKnown RBP21.07■□□□□ 0.96
LRCH3-208ENST00000443727 INTS2Q9H0H0 1204 aaKnown RBP21.07■□□□□ 0.96
LRCH3-208ENST00000443727 MARCH2Q9P0N8 246 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 MMP17Q9ULZ9 603 aa21.07■□□□□ 0.96
LRCH3-208ENST00000443727 STC2O76061 302 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 KLF8O95600 359 aaPredicted RBP21.06■□□□□ 0.96
LRCH3-208ENST00000443727 GCNT1Q02742 428 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 ADIGQ0VDE8 80 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 TPD52L1Q16890 204 aaPredicted RBP21.06■□□□□ 0.96
LRCH3-208ENST00000443727 GRAMD4Q6IC98 578 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 LCLAT1Q6UWP7 414 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 ARHGEF19Q8IW93 802 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 ETFBKMTQ8IXQ9 262 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 MLKLQ8NB16 471 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 RBBP8NLQ8NC74 664 aaPredicted RBP21.06■□□□□ 0.96
LRCH3-208ENST00000443727 TFAP2BQ92481 460 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 DCLK3Q9C098 648 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 DNAJC17Q9NVM6 304 aaKnown RBP21.06■□□□□ 0.96
LRCH3-208ENST00000443727 EBF1Q9UH73 591 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 ZNF510Q9Y2H8 683 aa21.06■□□□□ 0.96
LRCH3-208ENST00000443727 A0A0A0MRY4 1105 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 SLC12A8A0AV02 714 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 M0QYV0 167 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 KRT5P13647 590 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 LCP1P13796 627 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 TYRP14679 529 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 BRD2P25440 801 aaKnown RBP21.05■□□□□ 0.96
LRCH3-208ENST00000443727 LMNB2Q03252 620 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 STILQ15468 1287 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 CNGA2Q16280 664 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 HSF5Q4G112 596 aaPredicted RBP21.05■□□□□ 0.96
LRCH3-208ENST00000443727 EOGTQ5NDL2 527 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 C10orf76Q5T2E6 689 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 EMC10Q5UCC4 262 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 PM20D1Q6GTS8 502 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 ANO7Q6IWH7 933 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 TXNDC5Q8NBS9 432 aaKnown RBP21.05■□□□□ 0.96
LRCH3-208ENST00000443727 RNF139Q8WU17 664 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 NDRG1Q92597 394 aaKnown RBP21.05■□□□□ 0.96
LRCH3-208ENST00000443727 BHMTQ93088 406 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 CNOT6LQ96LI5 555 aaKnown RBP21.05■□□□□ 0.96
LRCH3-208ENST00000443727 CLSTN2Q9H4D0 955 aa21.05■□□□□ 0.96
LRCH3-208ENST00000443727 ANTXRLA6NF34 631 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 RNF225M0QZC1 329 aaPredicted RBP21.04■□□□□ 0.96
LRCH3-208ENST00000443727 ALDH1A2O94788 518 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 CORO1AP31146 461 aaKnown RBP21.04■□□□□ 0.96
LRCH3-208ENST00000443727 RGS7P49802 495 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 CRY1Q16526 586 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 Q6ZNB5 142 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 KBTBD6Q86V97 674 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 PHTF2Q8N3S3 785 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 TERB1Q8NA31 727 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 IL17RCQ8NAC3 791 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 KCTD13Q8WZ19 329 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 RMDN1Q96DB5 314 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 PARD6AQ9NPB6 346 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 UBE2TQ9NPD8 197 aaPredicted RBP21.04■□□□□ 0.96
LRCH3-208ENST00000443727 OLA1Q9NTK5 396 aaKnown RBP21.04■□□□□ 0.96
LRCH3-208ENST00000443727 MARK1Q9P0L2 795 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.04■□□□□ 0.96
LRCH3-208ENST00000443727 MYOFQ9NZM1 2061 aa21.04■□□□□ 0.96
LRCH3-208ENST00000443727 CACNG3O60359 315 aa21.03■□□□□ 0.96
LRCH3-208ENST00000443727 LRP3O75074 770 aa21.03■□□□□ 0.96
LRCH3-208ENST00000443727 CHKAP35790 457 aa21.03■□□□□ 0.96
LRCH3-208ENST00000443727 USP39Q53GS9 565 aaKnown RBP21.03■□□□□ 0.96
LRCH3-208ENST00000443727 BSPRYQ5W0U4 402 aa21.03■□□□□ 0.96
LRCH3-208ENST00000443727 TRMT11Q7Z4G4 463 aaKnown RBP21.03■□□□□ 0.96
LRCH3-208ENST00000443727 ZNF513Q8N8E2 541 aaPredicted RBP21.03■□□□□ 0.96
LRCH3-208ENST00000443727 EDEM1Q92611 657 aa21.03■□□□□ 0.96
LRCH3-208ENST00000443727 CRACR2AQ9BSW2 395 aa21.03■□□□□ 0.96
LRCH3-208ENST00000443727 POLMQ9NP87 494 aaPredicted RBP21.03■□□□□ 0.96
LRCH3-208ENST00000443727 ZDHHC4Q9NPG8 344 aa21.03■□□□□ 0.96
LRCH3-208ENST00000443727 CNGB3Q9NQW8 809 aa21.03■□□□□ 0.96
LRCH3-208ENST00000443727 BCCIPQ9P287 314 aaKnown RBP eCLIP21.03■□□□□ 0.96
LRCH3-208ENST00000443727 PRR5-ARHGAP8B1AHC4 643 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 SGK1O00141 431 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 TRIM24O15164 1050 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 CALCAP01258 141 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 KLKB1P03952 638 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 GBP1P32455 592 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 KIR2DL1P43626 348 aaPredicted RBP21.02■□□□□ 0.96
LRCH3-208ENST00000443727 MTIF2P46199 727 aaKnown RBP21.02■□□□□ 0.96
LRCH3-208ENST00000443727 ARHGAP8P85298 464 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 ELF2Q15723 593 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 RSPO4Q2I0M5 234 aaPredicted RBP21.02■□□□□ 0.96
LRCH3-208ENST00000443727 PKDCCQ504Y2 493 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 DENND1CQ8IV53 801 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 KCNV2Q8TDN2 545 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 GOLGA1Q92805 767 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 LOXL4Q96JB6 756 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 KREMEN1Q96MU8 473 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 TPSD1Q9BZJ3 242 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 NUP62CLQ9H1M0 184 aa21.02■□□□□ 0.96
LRCH3-208ENST00000443727 SEMA4GQ9NTN9 838 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms