RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 TAS2R40P59535 323 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 RPL10AP62906 217 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 NKX1-1Q15270 411 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 XKR5Q6UX68 686 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DCAKDQ8WVC6 231 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 NSMCE3Q96MG7 304 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 NLRP4Q96MN2 994 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SETDB2Q96T68 719 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 GPR88Q9GZN0 384 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 UPF3AQ9H1J1 476 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 WDR41Q9HAD4 459 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DMAC2Q9NW81 257 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 ZNF701M0R085 212 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 TP73O15350 636 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PSME3P61289 254 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 BMPR2Q13873 1038 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PERM1Q5SV97 790 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 KBTBD6Q86V97 674 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 HSD17B14Q9BPX1 270 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 NOL11Q9H8H0 719 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 SPC25Q9HBM1 224 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 AURKCQ9UQB9 309 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SDR42E2A6NKP2 422 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 ZNF839A8K0R7 811 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TFDP3Q5H9I0 405 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 RWDD4Q6NW29 188 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 FASTKD5Q7L8L6 764 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 CBWD2Q8IUF1 395 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CALN1Q9BXU9 219 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 C17orf75Q9HAS0 396 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PARVBQ9HBI1 364 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SUN2Q9UH99 717 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 A0A0B4J269 797 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 GNPATO15228 680 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 FUCA1P04066 466 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SERPINB10P48595 397 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 NRF1Q16656 503 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 GPR107Q5VW38 600 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 IGDCC3Q8IVU1 814 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TDRD5Q8NAT2 981 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 OTUD5Q96G74 571 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DHRS1Q96LJ7 313 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 LMTK3Q96Q04 1460 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 FBXO21O94952 628 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 RFC4P35249 363 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CRKLP46109 303 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 CCDC106Q9BWC9 280 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TMEM8AQ9HCN3 771 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SIRPGQ9P1W8 387 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TRPC5Q9UL62 973 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 E2F8A0AVK6 867 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DAB1O75553 588 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 APRTP07741 180 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DHRS4L1P0CG22 281 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 FDX1P10109 184 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 RPL22P35268 128 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 ABCB5Q2M3G0 1257 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CCNYL1Q8N7R7 359 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PDPRQ8NCN5 879 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 LXNQ9BS40 222 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 OSBPL10Q9BXB5 764 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TCF7L2Q9NQB0 619 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PCSK1NQ9UHG2 260 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 MYH13Q9UKX3 1938 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 IL1BP01584 269 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PABPC1P11940 636 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 CDH15P55291 814 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 NEDD8Q15843 81 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TPTE2Q6XPS3 522 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CAMK1DQ8IU85 385 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DSELQ8IZU8 1212 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TMEM35BQ8NCS4 154 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 ZC3H15Q8WU90 426 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 MECRQ9BV79 373 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SAC3D1A6NKF1 404 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 PIK3R2O00459 728 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 DLGAP3O95886 979 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 GSSP48637 474 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 ABCE1P61221 599 aaKnown RBP5.17□□□□□ -1.58
HERC1-201ENST00000443617 ZNF677Q86XU0 584 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 CCDC103Q8IW40 242 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 TMIGD2Q96BF3 282 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 POLR1BQ9H9Y6 1135 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 PNPOQ9NVS9 261 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 SF3B1O75533 1304 aaKnown RBP eCLIP5.17□□□□□ -1.582e-6■■■■■ 71.2
HERC1-201ENST00000443617 WTIPA6NIX2 430 aaPredicted RBP5.17□□□□□ -1.58
HERC1-201ENST00000443617 SPTLC1O15269 473 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 CSPG5O95196 566 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 CPOXP36551 454 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 MFSD14BQ5SR56 506 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 BBS12Q6ZW61 710 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 SLC15A3Q8IY34 581 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 MCEEQ96PE7 176 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 HEPHQ9BQS7 1158 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 IKZF4Q9H2S9 585 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 DHX33Q9H6R0 707 aaKnown RBP5.17□□□□□ -1.58
HERC1-201ENST00000443617 ZNF395Q9H8N7 513 aaPredicted RBP5.17□□□□□ -1.58
HERC1-201ENST00000443617 J3QRK9 145 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 KRT8P05787 483 aa5.17□□□□□ -1.58
HERC1-201ENST00000443617 ENO3P13929 434 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms