RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 SLC7A8Q9UHI5 535 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 CNOT11Q9UKZ1 510 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 PITPNM1O00562 1244 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 PIGNO95427 931 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 PDCP20941 246 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 RNASE9P60153 205 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 RALGDSQ12967 914 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 NCAPHQ15003 741 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 CTXN3Q4LDR2 81 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 FNDC3BQ53EP0 1204 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 VARS2Q5ST30 1063 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 VWA5B1Q5TIE3 1220 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 BTN2A2Q8WVV5 523 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 PLD4Q96BZ4 506 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 TMX3Q96JJ7 454 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 KCNC2Q96PR1 638 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 INTS7Q9NVH2 962 aaKnown RBP10.95□□□□□ -0.66
SYNE2-206ENST00000441438 DUOX1Q9NRD9 1551 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 ANKRD36CQ5JPF3 1778 aa10.95□□□□□ -0.66
SYNE2-206ENST00000441438 CEMIPQ8WUJ3 1361 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 PFKMP08237 780 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 METAP1P53582 386 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 EN1Q05925 392 aaPredicted RBP10.94□□□□□ -0.66
SYNE2-206ENST00000441438 MAP3K12Q12852 859 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 SHEQ5VZ18 495 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 IQSEC1Q6DN90 963 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 PADI6Q6TGC4 694 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 MACC1Q6ZN28 852 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 CCDC25Q86WR0 208 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 COL23A1Q86Y22 540 aaPredicted RBP10.94□□□□□ -0.66
SYNE2-206ENST00000441438 SULF2Q8IWU5 870 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 HACE1Q8IYU2 909 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 TTLL6Q8N841 843 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 MAB21L3Q8N8X9 362 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 ADAMTS15Q8TE58 950 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 ASZ1Q8WWH4 475 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 SGF29Q96ES7 293 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 C7orf26Q96N11 449 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 NOX5Q96PH1 765 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 UHRF1Q96T88 793 aaPredicted RBP10.94□□□□□ -0.66
SYNE2-206ENST00000441438 RSRP1Q9BUV0 290 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 RNF38Q9H0F5 515 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 CACNG4Q9UBN1 327 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 MAGED2Q9UNF1 606 aaPredicted RBP10.94□□□□□ -0.66
SYNE2-206ENST00000441438 MEGF6O75095 1541 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 ATP10DQ9P241 1426 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 CCDC171Q6TFL3 1326 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 ZSCAN5BA6NJL1 495 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 TBX10O75333 385 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 CRTAMO95727 393 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 SCAND1P57086 179 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 TRADDQ15628 312 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 FLYWCH1Q4VC44 716 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 PABPC1LQ4VXU2 614 aaKnown RBP10.94□□□□□ -0.66
SYNE2-206ENST00000441438 SGO1Q5FBB7 561 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 CES4AQ5XG92 561 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 TRIM72Q6ZMU5 477 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 GPR149Q86SP6 731 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 CLHC1Q8NHS4 586 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 SH3GL2Q99962 352 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 STRA6Q9BX79 667 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 BBS2Q9BXC9 721 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 KCNH6Q9H252 994 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 TPK1Q9H3S4 243 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 SLC52A2Q9HAB3 445 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
SYNE2-206ENST00000441438 CLDN3O15551 220 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CACNG3O60359 315 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 BEST1O76090 585 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 GNA14O95837 355 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 ALDH1A1P00352 501 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CCDC166P0CW27 439 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 GHRP10912 638 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 EDN3P14138 238 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 LIG3P49916 1009 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 FXR2P51116 673 aaKnown RBP eCLIP10.93□□□□□ -0.663e-6■■■■□ 25.3
SYNE2-206ENST00000441438 RPS26P62854 115 aaKnown RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 ARHGAP19Q14CB8 494 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 NCAPH2Q6IBW4 605 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 RABEPKQ7Z6M1 372 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 TMEM200AQ86VY9 491 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 ACSBG1Q96GR2 724 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 HAUS8Q9BT25 410 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 MLPHQ9BV36 600 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 SHCBP1LQ9BZQ2 653 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 WNT8AQ9H1J5 351 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 COPS7BQ9H9Q2 264 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-206ENST00000441438 KCNK13Q9HB14 408 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 SLC8A2Q9UPR5 921 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 SNX9Q9Y5X1 595 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 TLL2Q9Y6L7 1015 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 PIAS3Q9Y6X2 628 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 PNMA6EA0A0J9YXQ4 647 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 GSAPA4D1B5 854 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CBR3O75828 277 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 MX1P20591 662 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 GLRA2P23416 452 aa10.93□□□□□ -0.66
SYNE2-206ENST00000441438 CAMLGP49069 296 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms