RNA–Protein interactions for RNA: ENST00000441402.5

TMEM39B-203, Transcript of transmembrane protein 39B, humanhuman

TSL 1 (best)

Gene TMEM39B, Length 1,538 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-203ENST00000441402 NCAM1P13591 858 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 PBX3P40426 434 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 ATXN1P54253 815 aaKnown RBP17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 VCPP55072 806 aaKnown RBP17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 PITX1P78337 314 aaPredicted RBP17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 DEFB103AP81534 67 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 DEUP1Q05D60 604 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 KRT81Q14533 505 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 PPP1R7Q15435 360 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 CA9Q16790 459 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 ANKRD20A8PQ5CZ79 823 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 SLC9A4Q6AI14 798 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 SLC8B1Q6J4K2 584 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 RFX6Q8HWS3 928 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 NUP93Q8N1F7 819 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 MREGQ8N565 214 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 SCAMP5Q8TAC9 235 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 CEP295NLQ96MC4 621 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 ABCC13Q9NSE7 274 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 MTMR10Q9NXD2 777 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 MTRRQ9UBK8 725 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 DNPEPQ9ULA0 475 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 AP4E1Q9UPM8 1137 aa17.71■□□□□ 0.43
TMEM39B-203ENST00000441402 FAM92AA1XBS5 289 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 MTMR11A4FU01 709 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 IVDP26440 423 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 KRT17Q04695 432 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 MMRN1Q13201 1228 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 EIF4EBP2Q13542 120 aaPredicted RBP17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 HLTFQ14527 1009 aaKnown RBP eCLIP17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 RSPO2Q6UXX9 243 aaPredicted RBP17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 SND1Q7KZF4 910 aaKnown RBP eCLIP17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 SCN4BQ8IWT1 228 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 SLC39A11Q8N1S5 342 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 ACTL9Q8TC94 416 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 CCHCR1Q8TD31 782 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 SPATA17Q96L03 361 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 B3GALT6Q96L58 329 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 ZNF558Q96NG5 402 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 DPH5Q9H2P9 285 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 FBXO44Q9H4M3 255 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 WDR6Q9NNW5 1121 aaKnown RBP17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 ZDHHC18Q9NUE0 388 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 GPATCH2LQ9NWQ4 482 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 GRHL1Q9NZI5 618 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 WHRNQ9P202 907 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 SCML2Q9UQR0 700 aa17.7■□□□□ 0.42
TMEM39B-203ENST00000441402 FAM153BP0C7A2 387 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 CPB1P15086 417 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 LAG3P18627 525 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 ITIH2P19823 946 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 TGM2P21980 687 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 RPL21P46778 160 aaKnown RBP17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 OTUD4Q01804 1114 aaKnown RBP17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 SCAPQ12770 1279 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 FAM153CQ494X1 144 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 MON1AQ86VX9 555 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 FAM131BQ86XD5 332 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 GPR65Q8IYL9 337 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 ALLCQ8N6M5 410 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 CCDC185Q8N715 623 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 CCDC89Q8N998 374 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 ATAD1Q8NBU5 361 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 FBXO22Q8NEZ5 403 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 VN1R3Q9BXE9 311 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 NEUROG2Q9H2A3 272 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 DHX35Q9H5Z1 703 aaKnown RBP17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 PRDM10Q9NQV6 1147 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 PIGVQ9NUD9 493 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 FAM153AQ9UHL3 310 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 FBXW11Q9UKB1 542 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 ZNF148Q9UQR1 794 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 SNX24Q9Y343 169 aa17.69■□□□□ 0.42
TMEM39B-203ENST00000441402 IGLV3-25P01717 112 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 SOD2P04179 222 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 HAPLN1P10915 354 aaPredicted RBP17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 ZFXP17010 805 aaPredicted RBP17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 KLRC2P26717 231 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 ADRA1BP35368 520 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 CXCR3P49682 368 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 YWHAGP61981 247 aaKnown RBP eCLIP17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 PPIGQ13427 754 aaKnown RBP eCLIP17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 BTG3Q14201 252 aaPredicted RBP17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 ARHGAP18Q8N392 663 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 PQLC3Q8N755 202 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 PCDH19Q8TAB3 1148 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 SLC7A14Q8TBB6 771 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 ART4Q93070 314 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 CCDC114Q96M63 670 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 TRIM31Q9BZY9 425 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 HSFX1Q9UBD0 423 aa17.68■□□□□ 0.42
TMEM39B-203ENST00000441402 RTN3O95197 1032 aaPredicted RBP17.67■□□□□ 0.42
TMEM39B-203ENST00000441402 VNN2O95498 520 aa17.67■□□□□ 0.42
TMEM39B-203ENST00000441402 ACRP10323 421 aa17.67■□□□□ 0.42
TMEM39B-203ENST00000441402 TNNT3P45378 269 aaPredicted RBP17.67■□□□□ 0.42
TMEM39B-203ENST00000441402 ZNF135P52742 658 aaPredicted RBP17.67■□□□□ 0.42
TMEM39B-203ENST00000441402 RPL10AP62906 217 aaKnown RBP17.67■□□□□ 0.42
TMEM39B-203ENST00000441402 NOMO1Q15155 1222 aa17.67■□□□□ 0.42
TMEM39B-203ENST00000441402 DDR2Q16832 855 aa17.67■□□□□ 0.42
TMEM39B-203ENST00000441402 ZDHHC24Q6UX98 284 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms