RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ABRAQ8N0Z2 381 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 NACC2Q96BF6 587 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 ARHGEF4Q9NR80 690 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 PI4KBQ9UBF8 816 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 PCDHGB4Q9UN71 923 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 PCDHGB5Q9Y5G0 923 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 F7P08709 466 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 TFPTP0C1Z6 253 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 ADRA2BP18089 450 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 NOMO3P69849 1222 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 TAF5Q15542 800 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 TMEM259Q4ZIN3 620 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 RARS2Q5T160 578 aaKnown RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 GPAT2Q6NUI2 795 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 HACE1Q8IYU2 909 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 SLC7A5P1Q8MH63 180 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 STKLD1Q8NE28 680 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 DCUN1D1Q96GG9 259 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 ZBTB45Q96K62 511 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 TDRD3Q9H7E2 651 aaKnown RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 SLC17A6Q9P2U8 582 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 SEPT9Q9UHD8 586 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 CCPG1Q9ULG6 757 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 AP4B1Q9Y6B7 739 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 A0A088AWK7 358 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 TCP10L2B9ZVM9 353 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 ITM2AO43736 263 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 PEX14O75381 377 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 CDH6P55285 790 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 CRADDP78560 199 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 ROR1Q01973 937 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 MAP3K10Q02779 954 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 TLR1Q15399 786 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 MTERF2Q49AM1 385 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 PDPK2PQ6A1A2 396 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 FBXL19Q6PCT2 694 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 MON1BQ7L1V2 547 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 TTLL6Q8N841 843 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 ADAM32Q8TC27 787 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 ZNF606Q8WXB4 792 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 TMA16Q96EY4 203 aaKnown RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 CCDC68Q9H2F9 335 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 POMPQ9Y244 141 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 HBS1LQ9Y450 684 aaKnown RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 ZNF536O15090 1300 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 KDM1AO60341 852 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 CSDE1O75534 798 aaKnown RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 CSPG5O95196 566 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 PDGFRBP09619 1106 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 FDFT1P37268 417 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 MSLNQ13421 630 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-209ENST00000439886 DPYSL3Q14195 570 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 FLOT2Q14254 428 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 UGCGQ16739 394 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 LRRC43Q8N309 656 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 EME1Q96AY2 570 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 C20orf27Q9GZN8 174 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 RNPEPQ9H4A4 650 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 CDH22Q9UJ99 828 aa12.09□□□□□ -0.47
SMPD4-209ENST00000439886 ATRNL1Q5VV63 1379 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 HSPA4LO95757 839 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 ZBED1O96006 694 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 KRT3P12035 628 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 ABCG1P45844 678 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 CRKP46108 304 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 OGDHQ02218 1023 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 TRPC3Q13507 836 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 CUL2Q13617 745 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 ITPRIPL1Q6GPH6 555 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 NEK10Q6ZWH5 1172 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 ZFP28Q8NHY6 868 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 SMYD2Q9NRG4 433 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 GPATCH2LQ9NWQ4 482 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 ADA2Q9NZK5 511 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 SCAF8Q9UPN6 1271 aaKnown RBP12.08□□□□□ -0.48
SMPD4-209ENST00000439886 MRPL11Q9Y3B7 192 aaKnown RBP12.08□□□□□ -0.48
SMPD4-209ENST00000439886 CLRN2A0PK11 232 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 RFC1P35251 1148 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-209ENST00000439886 SLC18A1P54219 525 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 SESN2P58004 480 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-209ENST00000439886 MTMR1Q13613 665 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 PRKG1Q13976 671 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 SPDYAQ5MJ70 313 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 ZNF362Q5T0B9 420 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-209ENST00000439886 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 KCTD17Q8N5Z5 321 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 TMEM35BQ8NCS4 154 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 IL31RAQ8NI17 732 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 ATP2A3Q93084 1043 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 MARK4Q96L34 752 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 TRPV6Q9H1D0 765 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 PPCSQ9HAB8 311 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 PLLPQ9Y342 182 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 COL18A1P39060 1754 aa12.08□□□□□ -0.48
SMPD4-209ENST00000439886 IQCA1LA6NCM1 817 aa12.07□□□□□ -0.48
SMPD4-209ENST00000439886 XPOTO43592 962 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms