RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 DARS2Q6PI48 645 aaKnown RBP14.05□□□□□ -0.16
PCNX3-202ENST00000439247 METTL25Q8N6Q8 603 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 KCTD6Q8NC69 237 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 CHURC1Q8WUH1 139 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 CLEC4DQ8WXI8 215 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 TMEM143Q96AN5 459 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 KLRG1Q96E93 195 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 OLFM3Q96PB7 478 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 RAVER2Q9HCJ3 691 aaKnown RBP14.05□□□□□ -0.16
PCNX3-202ENST00000439247 GPAMQ9HCL2 828 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 RAB6BQ9NRW1 208 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 SIRPGQ9P1W8 387 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 DNAJC16Q9Y2G8 782 aa14.05□□□□□ -0.16
PCNX3-202ENST00000439247 C15orf38-AP3S2A0A0A6YYH1 394 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 LYPLA2O95372 231 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 SERPINA6P08185 405 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 ITGA2BP08514 1039 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 ATXN3P54252 364 aaPredicted RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 YWHAZP63104 245 aaKnown RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 TUBB3Q13509 450 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 PPP6R3Q5H9R7 873 aaPredicted RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 UGT2A3Q6UWM9 527 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 BBS12Q6ZW61 710 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 ARPINQ7Z6K5 226 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 UBAP1Q9NZ09 502 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 SPDYE16A6NNV3 312 aaPredicted RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 FKBP6O75344 327 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 USP2O75604 605 aaPredicted RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 SNRPAP09012 282 aaKnown RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 FAM200BP0CF97 657 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 STX3Q13277 289 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 PIGHQ14442 188 aaPredicted RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 ATG16L1Q676U5 607 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 DENND1BQ6P3S1 775 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 MAVSQ7Z434 540 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 DEFB107AQ8IZN7 70 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 MPP5Q8N3R9 675 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 NME8Q8N427 588 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 SAMD3Q8N6K7 520 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 DTNBP1Q96EV8 351 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 TARS2Q9BW92 718 aaKnown RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 POLR3FQ9H1D9 316 aaPredicted RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 XAB2Q9HCS7 855 aaKnown RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 PNPOQ9NVS9 261 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 DDX56Q9NY93 547 aaKnown RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 ZC3H7BQ9UGR2 993 aaKnown RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 SEPT9Q9UHD8 586 aaPredicted RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 ZNF112Q9UJU3 913 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 APPL1Q9UKG1 709 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 INPP5FQ9Y2H2 1132 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 GARTP22102 1010 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 PTPN20Q4JDL3 420 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 SWSAP1Q6NVH7 229 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 KYAT3Q6YP21 454 aaKnown RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 ADGRF2Q8IZF7 708 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 GRIP2Q9C0E4 1043 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 CDH22Q9UJ99 828 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 POMPQ9Y244 141 aa14.04□□□□□ -0.16
PCNX3-202ENST00000439247 HEMK1Q9Y5R4 338 aaPredicted RBP14.04□□□□□ -0.16
PCNX3-202ENST00000439247 A0A1B0GTW7 788 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 STAM2O75886 525 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 CALB1P05937 261 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 F7P08709 466 aaPredicted RBP14.03□□□□□ -0.16
PCNX3-202ENST00000439247 TNFSF9P41273 254 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 CHN2P52757 468 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 GRM2Q14416 872 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 TMC7Q7Z402 723 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 PHTF2Q8N3S3 785 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 PPP1R14CQ8TAE6 165 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 SYTL5Q8TDW5 730 aaPredicted RBP14.03□□□□□ -0.16
PCNX3-202ENST00000439247 NTPCRQ9BSD7 190 aaKnown RBP14.03□□□□□ -0.16
PCNX3-202ENST00000439247 MAN1C1Q9NR34 630 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 PIH1D1Q9NWS0 290 aaKnown RBP14.03□□□□□ -0.16
PCNX3-202ENST00000439247 IL1RAPL1Q9NZN1 696 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 WDR64B1ANS9 1081 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 MAGEB3O15480 346 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 SIN3BO75182 1162 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 SNNO75324 88 aaPredicted RBP14.03□□□□□ -0.16
PCNX3-202ENST00000439247 IL1BP01584 269 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 TFAP2AP05549 437 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 BPGMP07738 259 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 KRT3P12035 628 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 PTPRAP18433 802 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 PCSK6P29122 969 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 ARRB2P32121 409 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 PTPN7P35236 360 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 MYL6P60660 151 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 KCNJ11Q14654 390 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 MTERF2Q49AM1 385 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 ACSS2Q9NR19 701 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 ZDHHC7Q9NXF8 308 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 NR2E3Q9Y5X4 410 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 MAD1L1Q9Y6D9 718 aa14.03□□□□□ -0.16
PCNX3-202ENST00000439247 H3BNX3 289 aa14.02□□□□□ -0.16
PCNX3-202ENST00000439247 H7C0C1 242 aa14.02□□□□□ -0.16
PCNX3-202ENST00000439247 MCF2LO15068 1137 aa14.02□□□□□ -0.16
PCNX3-202ENST00000439247 KRT37O76014 449 aa14.02□□□□□ -0.16
PCNX3-202ENST00000439247 APRTP07741 180 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms