RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 TARBP2Q15633 366 aaKnown RBP12.48□□□□□ -0.41
NEK1-201ENST00000439128 PKN1Q16512 942 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 STAMBPL1Q96FJ0 436 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 MED8Q96G25 268 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 UBA2Q9UBT2 640 aaPredicted RBP12.48□□□□□ -0.41
NEK1-201ENST00000439128 MRPS17Q9Y2R5 130 aaKnown RBP12.48□□□□□ -0.41
NEK1-201ENST00000439128 DEPDC5O75140 1603 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 PYGBP11216 843 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 GLRA2P23416 452 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 SLC47A2Q86VL8 602 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 DEFB106AQ8N104 65 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 FAM32AQ9Y421 112 aaKnown RBP12.48□□□□□ -0.41
NEK1-201ENST00000439128 FGF19O95750 216 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 PCBP1Q15365 356 aaKnown RBP eCLIP12.48□□□□□ -0.41
NEK1-201ENST00000439128 INSCQ1MX18 579 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 MMGT1Q8N4V1 131 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 VGLL2Q8N8G2 317 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 DAB2P98082 770 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 CENPCQ03188 943 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 HIC1Q14526 733 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 MYLPFQ96A32 169 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 SGF29Q96ES7 293 aa12.48□□□□□ -0.41
NEK1-201ENST00000439128 A0A1B0GTH6 734 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 NFKBIEO00221 500 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 CYP3A4P08684 503 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 ABCE1P61221 599 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 BOP1Q14137 746 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 TOMM20Q15388 145 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 ERMARDQ5T6L9 678 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 KRT80Q6KB66 452 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 SLC24A5Q71RS6 500 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 VPS37AQ8NEZ2 397 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 SCLYQ96I15 445 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 ELAC2Q9BQ52 826 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 UBIAD1Q9Y5Z9 338 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 LSM8O95777 96 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 GLP2RO95838 553 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 SERPINA4P29622 427 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 MTF1Q14872 753 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 RAB30Q15771 203 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 DDR2Q16832 855 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 RAP1GAP2Q684P5 730 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 LRRC8EQ6NSJ5 796 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 SPATS2Q86XZ4 545 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 COG1Q8WTW3 980 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 NAF1Q96HR8 494 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 TKTL2Q9H0I9 626 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 TBC1D13Q9NVG8 400 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 CDV3Q9UKY7 258 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 MED1Q15648 1581 aaPredicted RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 SMIM35A0A1B0GVV1 85 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 TREHO43280 583 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 LGR5O75473 907 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 STAU1O95793 577 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 LTFP02788 710 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 CYP2F1P24903 491 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 RPL9P32969 192 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 MAPRE2Q15555 327 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 HLA-DQA1Q5Y7H0 255 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 KLHL29Q96CT2 875 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 GBP5Q96PP8 586 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 EXO5Q9H790 373 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 CDH9Q9ULB4 789 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 TNFSF13BQ9Y275 285 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 BRCC3P46736 316 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 TRAPPC5Q8IUR0 188 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 NUP93Q8N1F7 819 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 IL31RAQ8NI17 732 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 ANLNQ9NQW6 1124 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 TRMT13Q9NUP7 481 aaKnown RBP12.47□□□□□ -0.41
NEK1-201ENST00000439128 PPLO60437 1756 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 IRS2Q9Y4H2 1338 aa12.47□□□□□ -0.41
NEK1-201ENST00000439128 PSTPIP1O43586 416 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 PLA2G6O60733 806 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 GTF2A1P52655 376 aaPredicted RBP12.46□□□□□ -0.41
NEK1-201ENST00000439128 GPM6BQ13491 265 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 ARMC12Q5T9G4 340 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 USP45Q70EL2 814 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 PTAR1Q7Z6K3 402 aaPredicted RBP12.46□□□□□ -0.41
NEK1-201ENST00000439128 SYTL1Q8IYJ3 562 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 CAMKK1Q8N5S9 505 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 ING5Q8WYH8 240 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 C9orf72Q96LT7 481 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 C11orf84Q9BUA3 381 aaPredicted RBP12.46□□□□□ -0.41
NEK1-201ENST00000439128 C2orf49Q9BVC5 232 aaPredicted RBP12.46□□□□□ -0.41
NEK1-201ENST00000439128 PADI3Q9ULW8 664 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 ANKRD63C9JTQ0 380 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 DCTN3O75935 186 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 MLNP12872 115 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 KRT4P19013 534 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 CYP2C18P33260 490 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 NCKAP1LP55160 1127 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 MAGOHP61326 146 aaKnown RBP12.46□□□□□ -0.41
NEK1-201ENST00000439128 KDSRQ06136 332 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 STAT4Q14765 748 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 MSL3Q8N5Y2 521 aaKnown RBP12.46□□□□□ -0.41
NEK1-201ENST00000439128 POPDC2Q9HBU9 364 aa12.46□□□□□ -0.41
NEK1-201ENST00000439128 MRPL40Q9NQ50 206 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms