RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 ERCC4Q92889 916 aaPredicted RBP19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 TATDN2Q93075 761 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 SMOC1Q9H4F8 434 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 ZDHHC4Q9NPG8 344 aa19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 ARMCX3Q9UH62 379 aaPredicted RBP19.41■□□□□ 0.7
AC004540.1-201ENST00000439120 SDK1Q7Z5N4 2213 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 TCRBV21S2A2A0A5A6 115 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 MAP3K13O43283 966 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 CAVIN2O95810 425 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 TYRP14679 529 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 BYSLQ13895 437 aaKnown RBP19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 CBWD6Q4V339 395 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 CBWD3Q5JTY5 395 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 CBWD5Q5RIA9 395 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 PMS2CLQ68D20 193 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 RSRC2Q7L4I2 434 aaKnown RBP19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 ENGASEQ8NFI3 743 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 TIGD1Q96MW7 591 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 CLIC5Q9NZA1 410 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 RASAL2Q9UJF2 1139 aa19.4■□□□□ 0.7
AC004540.1-201ENST00000439120 BCLAF3A2AJT9 711 aaKnown RBP19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 TRIM49BA6NDI0 452 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 ZBTB24O43167 697 aaPredicted RBP19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 CACNG3O60359 315 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 DHPSP49366 369 aaPredicted RBP19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 LIMK1P53667 647 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 PMS1P54277 932 aaKnown RBP19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 COG7P83436 770 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 CUL2Q13617 745 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 GOLGA7BQ2TAP0 167 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 ARHGAP17Q68EM7 881 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 SDE2Q6IQ49 451 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 CYP2U1Q7Z449 544 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 SCD5Q86SK9 330 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 HESX1Q9UBX0 185 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 STRIP2Q9ULQ0 834 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 ZNF510Q9Y2H8 683 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 USP3Q9Y6I4 520 aa19.39■□□□□ 0.69
AC004540.1-201ENST00000439120 GREM1O60565 184 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 ADAM23O75077 832 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 HOXB2P14652 356 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 HNRNPLP14866 589 aaKnown RBP eCLIP19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 CD19P15391 556 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 BCKDHBP21953 392 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 PPP1R2P41236 205 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 EFEMP1Q12805 493 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 CCDC40Q4G0X9 1142 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 SGO2Q562F6 1265 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 STPG1Q5TH74 334 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 RNF43Q68DV7 783 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 ISM2Q6H9L7 571 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 THADAQ6YHU6 1953 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 PIGZQ86VD9 579 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 ZC3H3Q8IXZ2 948 aaKnown RBP19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 ZNF276Q8N554 614 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 ANKRD52Q8NB46 1076 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 SPATA20Q8TB22 786 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 BHMTQ93088 406 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 UBXN6Q9BZV1 441 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 METTL14Q9HCE5 456 aaKnown RBP19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 MARK1Q9P0L2 795 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 COQ4Q9Y3A0 265 aa19.38■□□□□ 0.69
AC004540.1-201ENST00000439120 STC2O76061 302 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 HMBSP08397 361 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 TBXAS1P24557 533 aaPredicted RBP19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 NTSR1P30989 418 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 DGKGP49619 791 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 TKTL1P51854 596 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 BCAT1P54687 386 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 LRMPQ12912 555 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 TCEAL6Q6IPX3 200 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 LPCAT2Q7L5N7 544 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 CHPFQ8IZ52 775 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 OLIG1Q8TAK6 271 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 RLN3Q8WXF3 142 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 TCEAL3Q969E4 200 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 DHTKD1Q96HY7 919 aaPredicted RBP19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 EDEM2Q9BV94 578 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 DCLK3Q9C098 648 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 LRRC4Q9HBW1 653 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 RXFP3Q9NSD7 469 aa19.37■□□□□ 0.69
AC004540.1-201ENST00000439120 TRIM24O15164 1050 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 ZBED1O96006 694 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 CHRM1P11229 460 aaPredicted RBP19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 CHKAP35790 457 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 P2RY2P41231 377 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 WASP42768 502 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 YWHAGP61981 247 aaKnown RBP eCLIP19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 CETN1Q12798 172 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 Q6ZNB5 142 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 SLC35C1Q96A29 364 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 CEP63Q96MT8 703 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 IPO9Q96P70 1041 aaKnown RBP19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 PLK2Q9NYY3 685 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 MARCH2Q9P0N8 246 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 TSPAN16Q9UKR8 245 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 STARD13Q9Y3M8 1113 aa19.36■□□□□ 0.69
AC004540.1-201ENST00000439120 NUP205Q92621 2012 aa19.35■□□□□ 0.69
AC004540.1-201ENST00000439120 XPO1O14980 1071 aaKnown RBP19.35■□□□□ 0.69
AC004540.1-201ENST00000439120 KHNYNO15037 678 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms