RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 MMP8P22894 467 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 FAM219BQ5XKK7 198 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 CASC4Q6P4E1 433 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 CES3Q6UWW8 571 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 MAP4K3Q8IVH8 894 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 SPNS2Q8IVW8 549 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 TBC1D22BQ9NU19 505 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 WNK3Q9BYP7 1800 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 BPTFQ12830 3046 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 C3orf70A6NLC5 250 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-204ENST00000438964 NOP56O00567 594 aaKnown RBP13.86□□□□□ -0.19
ACTN1-204ENST00000438964 KCNN4O15554 427 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 KRT37O76014 449 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 CSPG5O95196 566 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 STAMBPO95630 424 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 SERPINB2P05120 415 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 OSTNP61366 133 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 MRPS9P82933 396 aaKnown RBP13.86□□□□□ -0.19
ACTN1-204ENST00000438964 HNRNPDQ14103 355 aaKnown RBP13.86□□□□□ -0.19
ACTN1-204ENST00000438964 ANKDD1AQ495B1 522 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 TAS1R3Q7RTX0 852 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 ZBTB33Q86T24 672 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 CDR2LQ86X02 465 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-204ENST00000438964 C12orf56Q8IXR9 622 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 LARGE2Q8N3Y3 721 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 TTC13Q8NBP0 860 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 RAB3IL1Q8TBN0 382 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 PLAC1Q9HBJ0 212 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 ZNF232Q9UNY5 417 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 TEX264Q9Y6I9 313 aa13.86□□□□□ -0.19
ACTN1-204ENST00000438964 STAM2O75886 525 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 PENKP01210 267 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 RGS2P41220 211 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 RPL5P46777 297 aaKnown RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 GTF2A2P52657 109 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 CDH15P55291 814 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 YWHAZP63104 245 aaKnown RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 PDPK2PQ6A1A2 396 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 KLHL35Q6PF15 583 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 B3GNT9Q6UX72 402 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 TRIM42Q8IWZ5 723 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 GAB3Q8WWW8 586 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 EXOC7Q9UPT5 735 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 BPGMP07738 259 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 CCR10P46092 362 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 NUDT2P50583 147 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 PRKG1Q13976 671 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 Q3C1V9 767 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 TKFCQ3LXA3 575 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 N4BP2L1Q5TBK1 243 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 WDTC1Q8N5D0 677 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 GSDMBQ8TAX9 411 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 C7orf26Q96N11 449 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 SIKE1Q9BRV8 207 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 CEP41Q9BYV8 373 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 MAGEB5Q9BZ81 275 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 GPAMQ9HCL2 828 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 NXF1Q9UBU9 619 aaKnown RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 CCPG1Q9ULG6 757 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 SF3B1O75533 1304 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■■■■■ 155
ACTN1-204ENST00000438964 MCF2LO15068 1137 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 ZBTB14O43829 449 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 KDELR1P24390 212 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 SLC1A6P48664 564 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 PPIDQ08752 370 aaKnown RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 TUBB3Q13509 450 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 GRM2Q14416 872 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 ZACNQ401N2 412 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 PHF13Q86YI8 300 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 C10orf107Q8IVU9 208 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 MIPOL1Q8TD10 442 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 GMCL1Q96IK5 515 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 SENP6Q9GZR1 1112 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 RBAKQ9NYW8 714 aaPredicted RBP13.85□□□□□ -0.19
ACTN1-204ENST00000438964 PTTG2Q9NZH5 202 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 GABBR1Q9UBS5 961 aa13.85□□□□□ -0.19
ACTN1-204ENST00000438964 ZNF189O75820 626 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 PDGFRBP09619 1106 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 TNFSF9P41273 254 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 MAPK10P53779 464 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 SNAPC2Q13487 334 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 MTERF2Q49AM1 385 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 DENND1BQ6P3S1 775 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 SCYL2Q6P3W7 929 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 PCGF5Q86SE9 256 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 SDCCAG8Q86SQ7 713 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 WDR75Q8IWA0 830 aaKnown RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 RNF169Q8NCN4 708 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 TAAR1Q96RJ0 339 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 TARS2Q9BW92 718 aaKnown RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 SIRPGQ9P1W8 387 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 CYTH4Q9UIA0 394 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 GNEQ9Y223 722 aaKnown RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 SMIM31A0A1B0GVY4 71 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 C4BPAP04003 597 aaKnown RBP13.84□□□□□ -0.19
ACTN1-204ENST00000438964 KRT3P12035 628 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 CBX3Q13185 183 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 ITGA9Q13797 1035 aa13.84□□□□□ -0.19
ACTN1-204ENST00000438964 DRICH1Q6PGQ1 229 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms