RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 TMEM30AQ9NV96 361 aa14.9□□□□□ -0.02
LINC01088-201ENST00000437737 TOR4AQ9NXH8 423 aa14.9□□□□□ -0.02
LINC01088-201ENST00000437737 FNDC3AQ9Y2H6 1198 aaKnown RBP14.9□□□□□ -0.02
LINC01088-201ENST00000437737 PCDHB13Q9Y5F0 798 aa14.9□□□□□ -0.02
LINC01088-201ENST00000437737 PTPRJQ12913 1337 aa14.9□□□□□ -0.02
LINC01088-201ENST00000437737 MYH10P35580 1976 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 FLNBO75369 2602 aaKnown RBP14.89□□□□□ -0.03
LINC01088-201ENST00000437737 A0A087WV48 116 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 PRRT4C9JH25 899 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 CLDN5O00501 218 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 FLRT2O43155 660 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 TYRP14679 529 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 GAP43P17677 238 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 PTPN1P18031 435 aaKnown RBP14.89□□□□□ -0.03
LINC01088-201ENST00000437737 STARD3Q14849 445 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 SURF1Q15526 300 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 DUOXA2Q1HG44 320 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 HLA-BQ31612 363 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 DCAF12L1Q5VU92 463 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 TPGS1Q6ZTW0 290 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 BAHD1Q8TBE0 780 aaPredicted RBP14.89□□□□□ -0.03
LINC01088-201ENST00000437737 DNASE2BQ8WZ79 361 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 WBP2Q969T9 261 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 CCDC34Q96HJ3 373 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 DUSP9Q99956 384 aaKnown RBP14.89□□□□□ -0.03
LINC01088-201ENST00000437737 DPEP3Q9H4B8 488 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 WSB2Q9NYS7 404 aaPredicted RBP14.89□□□□□ -0.03
LINC01088-201ENST00000437737 NME7Q9Y5B8 376 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 ASXL3Q9C0F0 2248 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 HELZ2Q9BYK8 2649 aaKnown RBP14.89□□□□□ -0.03
LINC01088-201ENST00000437737 TMEM131Q92545 1883 aa14.89□□□□□ -0.03
LINC01088-201ENST00000437737 FAM149AA5PLN7 773 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 WASH3PC4AMC7 463 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 GFRA2O00451 464 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 BCAT2O15382 392 aaPredicted RBP14.88□□□□□ -0.03
LINC01088-201ENST00000437737 CACNG3O60359 315 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 GADD45BO75293 160 aaPredicted RBP14.88□□□□□ -0.03
LINC01088-201ENST00000437737 DGKGP49619 791 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 TUBP50607 506 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 CASP5P51878 434 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 TNNC1P63316 161 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 CCDC157Q569K6 752 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 RESP18Q5W5W9 173 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 PIP4K2CQ8TBX8 421 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 SLC39A7Q92504 469 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 B3GNT5Q9BYG0 378 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 GMIPQ9P107 970 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 WDR35Q9P2L0 1181 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 NFE2L3Q9Y4A8 694 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 ATP8B3O60423 1300 aa14.88□□□□□ -0.03
LINC01088-201ENST00000437737 ZNF233A6NK53 670 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 A8MXQ7 604 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 TACC1O75410 805 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 IDEP14735 1019 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 SLC5A3P53794 718 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 ALCAMQ13740 583 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 SUZ12Q15022 739 aaKnown RBP14.87□□□□□ -0.03
LINC01088-201ENST00000437737 FUT11Q495W5 492 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 PDCD7Q8N8D1 485 aaKnown RBP14.87□□□□□ -0.03
LINC01088-201ENST00000437737 B3GALNT2Q8NCR0 500 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 CADM4Q8NFZ8 388 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 SCAMP5Q8TAC9 235 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 KCNK16Q96T55 309 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 MED10Q9BTT4 135 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 USP36Q9P275 1121 aaKnown RBP14.87□□□□□ -0.03
LINC01088-201ENST00000437737 CCDC39Q9UFE4 941 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 LSM7Q9UK45 103 aaKnown RBP14.87□□□□□ -0.03
LINC01088-201ENST00000437737 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.87□□□□□ -0.03
LINC01088-201ENST00000437737 PCDHGB2Q9Y5G2 931 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 STON1Q9Y6Q2 735 aa14.87□□□□□ -0.03
LINC01088-201ENST00000437737 FAM237AA0A1B0GTK4 181 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 KIAA0391O15091 583 aaKnown RBP14.86□□□□□ -0.03
LINC01088-201ENST00000437737 DKK1O94907 266 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 LETM1O95202 739 aaPredicted RBP14.86□□□□□ -0.03
LINC01088-201ENST00000437737 BNC1Q01954 994 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 GOLGA8FQ08AF8 430 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 GOLGA8DPQ0D2H9 430 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 CAMK2BQ13554 666 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 WDR72Q3MJ13 1102 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 SNX30Q5VWJ9 437 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 SHC4Q6S5L8 630 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 HTR3DQ70Z44 454 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 SV2BQ7L1I2 683 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 TRAPPC11Q7Z392 1133 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 METTL3Q86U44 580 aaKnown RBP14.86□□□□□ -0.03
LINC01088-201ENST00000437737 CBWD2Q8IUF1 395 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 WDR49Q8IV35 697 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 SNX19Q92543 992 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 BHMTQ93088 406 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 CLIC6Q96NY7 704 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 TRIM9Q9C026 710 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 ITM2CQ9NQX7 267 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.86□□□□□ -0.035e-7■■■■■ 26.9
LINC01088-201ENST00000437737 OLFML3Q9NRN5 406 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 MARK1Q9P0L2 795 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 STK17AQ9UEE5 414 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 USP25Q9UHP3 1055 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 EIF2B4Q9UI10 523 aaKnown RBP14.86□□□□□ -0.03
LINC01088-201ENST00000437737 BTBD3Q9Y2F9 522 aa14.86□□□□□ -0.03
LINC01088-201ENST00000437737 ASH1LQ9NR48 2969 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms