RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 EIF3CLB5ME19 914 aaKnown RBP12.01□□□□□ -0.49
SNHG3-202ENST00000437681 PAPSS1O43252 624 aaPredicted RBP12.01□□□□□ -0.49
SNHG3-202ENST00000437681 ENDOD1O94919 500 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 HDCP19113 662 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 YWHAZP63104 245 aaKnown RBP12.01□□□□□ -0.49
SNHG3-202ENST00000437681 NTHL1P78549 312 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 CLUL1Q15846 466 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 XYLT1Q86Y38 959 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 SCAMP5Q8TAC9 235 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 BPIFB1Q8TDL5 484 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 IRF7Q92985 503 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 EIF3CQ99613 913 aaKnown RBP12.01□□□□□ -0.49
SNHG3-202ENST00000437681 OSBPL6Q9BZF3 934 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 HAUS4Q9H6D7 363 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 LUC7LQ9NQ29 371 aaKnown RBP12.01□□□□□ -0.49
SNHG3-202ENST00000437681 LSM7Q9UK45 103 aaKnown RBP12.01□□□□□ -0.49
SNHG3-202ENST00000437681 STAP1Q9ULZ2 295 aa12.01□□□□□ -0.49
SNHG3-202ENST00000437681 A0A1W2PQH9 124 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 TLR5O60602 858 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 GABBR2O75899 941 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 EIF2DP41214 584 aaKnown RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 PTPN9P43378 593 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 ASTE1Q2TB18 679 aaPredicted RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 BSPRYQ5W0U4 402 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 NUGGCQ68CJ6 796 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 RNF139Q8WU17 664 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 CPXM1Q96SM3 734 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 UHRF1Q96T88 793 aaPredicted RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 MARK1Q9P0L2 795 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 CYTH4Q9UIA0 394 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 TLR6Q9Y2C9 796 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 TCRBV5S1A1TA0A578 114 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 SIGLEC16A6NMB1 481 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 E5RJQ4 531 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 PI4K2BG5E9Z4 385 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 COCHO43405 550 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 ZNF135P52742 658 aaPredicted RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 BRMS1LQ5PSV4 323 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 SDHAF4Q5VUM1 108 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 ZNF571Q7Z3V5 609 aaPredicted RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 TMTC1Q8IUR5 882 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 ARID3BQ8IVW6 561 aaPredicted RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 MCOLN2Q8IZK6 566 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 CCDC26Q8TAB7 109 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 OSCP1Q8WVF1 389 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 USP13Q92995 863 aaPredicted RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 ZFRQ96KR1 1074 aaKnown RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 DDX23Q9BUQ8 820 aaKnown RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 KCNK12Q9HB15 430 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 MRPL47Q9HD33 250 aaKnown RBP12□□□□□ -0.49
SNHG3-202ENST00000437681 NAGPAQ9UK23 515 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 TMEM59LQ9UK28 342 aa12□□□□□ -0.49
SNHG3-202ENST00000437681 IRAK2O43187 625 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 HTR7P34969 479 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 MATKP42679 507 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 PPP2R5DQ14738 602 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 SLC18A3Q16572 532 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 RNF43Q68DV7 783 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 PLEKHA7Q6IQ23 1121 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 Q6ZNB5 142 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 TMC6Q7Z403 805 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 BMP8AQ7Z5Y6 402 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 RNF135Q8IUD6 432 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 SLC20A1Q8WUM9 679 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 SHDQ96IW2 340 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 PCDHB18PQ96TA0 734 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 TRMT61BQ9BVS5 477 aaKnown RBP11.99□□□□□ -0.49
SNHG3-202ENST00000437681 SYNCQ9H7C4 482 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 PARVAQ9NVD7 372 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 KIAA1549LQ6ZVL6 1849 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 CXorf51AA0A1B0GTR3 108 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 AP5Z1O43299 807 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 CYP4F8P98187 520 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 NRG1Q02297 640 aaPredicted RBP11.99□□□□□ -0.49
SNHG3-202ENST00000437681 NR1H3Q13133 447 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 STRADAQ7RTN6 431 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 YAF2Q8IY57 180 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 SLC44A3Q8N4M1 653 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 CCDC112Q8NEF3 446 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 ATP2A3Q93084 1043 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 NMUR1Q9HB89 426 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 ADAM22Q9P0K1 906 aa11.99□□□□□ -0.49
SNHG3-202ENST00000437681 MYO9BQ13459 2157 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 ANKRD62A6NC57 917 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 HEPACAM2A8MVW5 462 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 TULP2O00295 520 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 MAN2B1O00754 1011 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 NFATC1O95644 943 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 LCP1P13796 627 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 PPP1R15BQ5SWA1 713 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 NAA35Q5VZE5 725 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 VITQ6UXI7 678 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 FAM183BPQ6ZVS7 135 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 PSTKQ8IV42 348 aaKnown RBP11.98□□□□□ -0.49
SNHG3-202ENST00000437681 CPA6Q8N4T0 437 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 MAB21L3Q8N8X9 362 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 TC2NQ8N9U0 490 aa11.98□□□□□ -0.49
SNHG3-202ENST00000437681 CENPIQ92674 756 aaPredicted RBP11.98□□□□□ -0.49
SNHG3-202ENST00000437681 SLC39A13Q96H72 371 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms