RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 MTMR10Q9NXD2 777 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 RCOR3Q9P2K3 495 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-216ENST00000437340 DSEQ9UL01 958 aa26.73■■□□□ 1.87
CPNE1-216ENST00000437340 KBTBD13C9JR72 458 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 CDH16O75309 829 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 NR2C2P49116 596 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 SULT1E1P49888 294 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 ARL4CP56559 192 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 MAP3K7CLP57077 242 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 TUSC3Q13454 348 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 PPP6R3Q5H9R7 873 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-216ENST00000437340 RIBC1Q8N443 379 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-216ENST00000437340 RNF169Q8NCN4 708 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 RNF208Q9H0X6 261 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 STARD7Q9NQZ5 370 aa26.72■■□□□ 1.87
CPNE1-216ENST00000437340 MYBPHLA2RUH7 354 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 AP1G2O75843 785 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 TKTL1P51854 596 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 ATXN1P54253 815 aaKnown RBP26.71■■□□□ 1.87
CPNE1-216ENST00000437340 ZNF598Q86UK7 904 aaKnown RBP26.71■■□□□ 1.87
CPNE1-216ENST00000437340 METTL23Q86XA0 190 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 NPY6RQ99463 290 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 PAAF1Q9BRP4 392 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 USP29Q9HBJ7 922 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 POPDC2Q9HBU9 364 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 CNGB3Q9NQW8 809 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 PAK5Q9P286 719 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 TIMM13Q9Y5L4 95 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-216ENST00000437340 POMCP01189 267 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 XRCC4Q13426 336 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 DCAF6Q58WW2 860 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 RAB41Q5JT25 222 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 CTU1Q7Z7A3 348 aaKnown RBP26.71■■□□□ 1.87
CPNE1-216ENST00000437340 ECHDC2Q86YB7 292 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 KCTD15Q96SI1 283 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-216ENST00000437340 SMOQ99835 787 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 ACBD6Q9BR61 282 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 PPCSQ9HAB8 311 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 FZD10Q9ULW2 581 aa26.71■■□□□ 1.87
CPNE1-216ENST00000437340 ARHGEF37A1IGU5 675 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 E7ESA3 106 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 E7EVH7 732 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 M0QZQ0 153 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 DNM1LO00429 736 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 B3GAT3O94766 335 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 PDIA2Q13087 525 aaKnown RBP26.7■■□□□ 1.86
CPNE1-216ENST00000437340 CCDC185Q8N715 623 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 SLC43A3Q8NBI5 491 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 SMARCD1Q96GM5 515 aa26.7■■□□□ 1.86
CPNE1-216ENST00000437340 NDUFAB1O14561 156 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 TRAPPC3O43617 180 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 NDUFV1P49821 464 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 DAOAP59103 153 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 CBLBQ13191 982 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 ANKRD22Q5VYY1 191 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 FOXR1Q6PIV2 292 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 C4orf22Q6V702 233 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 EXOC3L1Q86VI1 746 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 CDKL3Q8IVW4 592 aaPredicted RBP26.69■■□□□ 1.86
CPNE1-216ENST00000437340 ZBED8Q8IZ13 594 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 ARHGEF2Q92974 986 aaKnown RBP26.69■■□□□ 1.86
CPNE1-216ENST00000437340 CSPG4P5Q96PW8 444 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 ZMYND15Q9H091 742 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 HEY1Q9Y5J3 304 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 C9IYK1 514 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 ZBED1O96006 694 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 OTUD1Q5VV17 481 aaPredicted RBP26.69■■□□□ 1.86
CPNE1-216ENST00000437340 TDRPQ86YL5 185 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 ZMIZ2Q8NF64 920 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 SELENOSQ9BQE4 189 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 RTP3Q9BQQ7 232 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 ULBP1Q9BZM6 244 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 CSNK1G1Q9HCP0 422 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 EURLQ9NYK6 297 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 OGDHLQ9ULD0 1010 aa26.69■■□□□ 1.86
CPNE1-216ENST00000437340 CHADO15335 359 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 CKBP12277 381 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 TSHRP16473 764 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 ARL4AP40617 200 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 AIF1P55008 147 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 BASP1P80723 227 aaKnown RBP26.68■■□□□ 1.86
CPNE1-216ENST00000437340 FASTKD3Q14CZ7 662 aaKnown RBP26.68■■□□□ 1.86
CPNE1-216ENST00000437340 FAM171BQ6P995 826 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 CD300LGQ6UXG3 332 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 PPP1R21Q6ZMI0 780 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 NLRP14Q86W24 1093 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 FAM131BQ86XD5 332 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 PDIK1LQ8N165 341 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 NDRG1Q92597 394 aaKnown RBP26.68■■□□□ 1.86
CPNE1-216ENST00000437340 SLC9A7Q96T83 725 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 RGS18Q9NS28 235 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 XPO7Q9UIA9 1087 aaKnown RBP26.68■■□□□ 1.86
CPNE1-216ENST00000437340 USP3Q9Y6I4 520 aa26.68■■□□□ 1.86
CPNE1-216ENST00000437340 GMNCA6NCL1 334 aa26.67■■□□□ 1.86
CPNE1-216ENST00000437340 KCNN4O15554 427 aa26.67■■□□□ 1.86
CPNE1-216ENST00000437340 FAM107AO95990 144 aa26.67■■□□□ 1.86
CPNE1-216ENST00000437340 CHN1P15882 459 aa26.67■■□□□ 1.86
CPNE1-216ENST00000437340 LBX1P52954 281 aa26.67■■□□□ 1.86
CPNE1-216ENST00000437340 RNASELQ05823 741 aaKnown RBP26.67■■□□□ 1.86
CPNE1-216ENST00000437340 DCLRE1AQ6PJP8 1040 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms