RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 FAM71DQ8N9W8 422 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 IL31RAQ8NI17 732 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZCRB1Q8TBF4 217 aaKnown RBP3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 SMCR8Q8TEV9 937 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 ASB5Q8WWX0 329 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 SUCLG2Q96I99 432 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZNF668Q96K58 619 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 FCRL5Q96RD9 977 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 PCDH12Q9NPG4 1184 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 STEAP1Q9UHE8 339 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 COG5Q9UP83 839 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 COL4A3BPQ9Y5P4 624 aa3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 SIRT4Q9Y6E7 314 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P31-201ENST00000437242 PYCARD-AS1I3L0S3 204 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 AGPSO00116 658 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 RRHO14718 337 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 TBX3O15119 743 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 PRAMEF2O60811 474 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 NDUFB8O95169 186 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 FGF2P09038 288 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 JAK3P52333 1124 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 SLC12A2P55011 1212 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 PPATQ06203 517 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 CCDC15Q0P6D6 951 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 ARHGEF7Q14155 803 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 ANO6Q4KMQ2 910 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 MICU3Q86XE3 530 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 TMEM199Q8N511 208 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 METTL25Q8N6Q8 603 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 PIGKQ92643 395 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 ACO2Q99798 780 aaKnown RBP3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 TUBB6Q9BUF5 446 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 CINPQ9BW66 212 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 STK31Q9BXU1 1019 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 SACM1LQ9NTJ5 587 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 SELENONQ9NZV5 590 aa3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 PNMA8BQ9ULN7 279 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P31-201ENST00000437242 TMEM272A0A1B0GTI8 110 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 TRIM43BA6NCK2 446 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 AKAP10O43572 662 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 SNX2O60749 519 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZC3H11AO75152 810 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 EPN2O95208 641 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 RPS6KB1P23443 525 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 ACVR2AP27037 513 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 PGGT1BP53609 377 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 EIF4A1P60842 406 aaKnown RBP3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 B3GNT9Q6UX72 402 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 USP49Q70CQ1 688 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 SLC44A5Q8NCS7 719 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 BCAS4Q8TDM0 211 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 TRIM43Q96BQ3 446 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 LRGUKQ96M69 825 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 AIFM3Q96NN9 605 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 PPP1R10Q96QC0 940 aaKnown RBP3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 MEIS3Q99687 375 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZCWPW1Q9H0M4 648 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 DHX36Q9H2U1 1008 aaKnown RBP3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 ATP6V0A4Q9HBG4 840 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 MSRB1Q9NZV6 116 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 SPATA31A1Q5TZJ5 1347 aa3.87□□□□□ -1.79
HMGB1P31-201ENST00000437242 SLC22A23A1A5C7 686 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 AQP7P3A6NL99 342 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZNF814B7Z6K7 855 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 RAB27BO00194 218 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 CA12O43570 354 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 TLX3O43711 291 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 PLA2G2AP14555 144 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 IBSPP21815 317 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 TBXAS1P24557 533 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 RBL1P28749 1068 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 NTSR1P30989 418 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 HOXA7P31268 230 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 GALNSP34059 522 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 CPT1AP50416 773 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 AGFG1P52594 562 aaKnown RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 WDR5P61964 334 aaKnown RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 MTA1Q13330 715 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 SLC29A2Q14542 456 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 PTPROQ16827 1216 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 PDXDC1Q6P996 788 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 CLEC9AQ6UXN8 241 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 COL23A1Q86Y22 540 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 P3H2Q8IVL5 708 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 FBXL14Q8N1E6 418 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 ZBTB34Q8NCN2 500 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 JPH3Q8WXH2 748 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 HIST1H2AAQ96QV6 131 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 B3GNT5Q9BYG0 378 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 FAM83DQ9H4H8 585 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 MLXIPLQ9NP71 852 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 PAPOLBQ9NRJ5 636 aaKnown RBP3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 STK32BQ9NY57 414 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 MDFICQ9P1T7 246 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 PCDHA12Q9UN75 941 aa3.86□□□□□ -1.79
HMGB1P31-201ENST00000437242 CCDC180Q9P1Z9 1646 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 TMEM225BP0DP42 221 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 BRAFP15056 766 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 TPH1P17752 444 aa3.85□□□□□ -1.79
HMGB1P31-201ENST00000437242 SUMO3P55854 103 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms