RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 ZIC5Q96T25 663 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 RHOBTB2Q9BYZ6 727 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 UBP1Q9NZI7 540 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 PSME4Q14997 1843 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 MYBPHLA2RUH7 354 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 LPXNO60711 386 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 USP12O75317 370 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 KCNA10Q16322 511 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 ZNF449Q6P9G9 518 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 TBC1D1Q86TI0 1168 aaPredicted RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 SPATS2Q86XZ4 545 aaKnown RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 CCDC185Q8N715 623 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 FNIP1Q8TF40 1166 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 CPT1BQ92523 772 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 AAASQ9NRG9 546 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 PADI3Q9ULW8 664 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 COPEO14579 308 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 ZFXP17010 805 aaPredicted RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 PCK1P35558 622 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 AFF1P51825 1210 aaKnown RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 PURAQ00577 322 aaKnown RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 FNBP1LQ5T0N5 605 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 LVRNQ6Q4G3 990 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 ARFGAP1Q8N6T3 406 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 TFB1MQ8WVM0 346 aaKnown RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 FOXP3Q9BZS1 431 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 C12orf65Q9H3J6 166 aaKnown RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 NRDE2Q9H7Z3 1164 aa12.62□□□□□ -0.39
CLDN4-203ENST00000435050 TRMT13Q9NUP7 481 aaKnown RBP12.62□□□□□ -0.39
CLDN4-203ENST00000435050 A0A0G2JND7 137 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 SHOX2O60902 331 aaPredicted RBP12.61□□□□□ -0.39
CLDN4-203ENST00000435050 DUSP11O75319 330 aaKnown RBP12.61□□□□□ -0.39
CLDN4-203ENST00000435050 MROH9Q5TGP6 573 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 SDHAF4Q5VUM1 108 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 CES3Q6UWW8 571 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 OSTM1Q86WC4 334 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 PLD5Q8N7P1 536 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 UBR7Q8N806 425 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 ARRDC4Q8NCT1 418 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 EMID1Q96A84 441 aaPredicted RBP12.61□□□□□ -0.39
CLDN4-203ENST00000435050 ETNK1Q9HBU6 452 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 ACAP1Q15027 740 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 BZW1Q7L1Q6 419 aaKnown RBP12.61□□□□□ -0.39
CLDN4-203ENST00000435050 RNF180Q86T96 592 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 NKD2Q969F2 451 aaPredicted RBP12.61□□□□□ -0.39
CLDN4-203ENST00000435050 WDCPQ9H6R7 721 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 TADA2AO75478 443 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 KRT37O76014 449 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 OR4Q2P0C623 313 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 CPB1P15086 417 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 MAGEA9P43362 315 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 OVGP1Q12889 678 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 PDCD7Q8N8D1 485 aaKnown RBP12.61□□□□□ -0.39
CLDN4-203ENST00000435050 CDKL2Q92772 493 aa12.61□□□□□ -0.39
CLDN4-203ENST00000435050 GNEQ9Y223 722 aaKnown RBP12.61□□□□□ -0.39
CLDN4-203ENST00000435050 TROVE2P10155 538 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 KITP10721 976 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 ODC1P11926 461 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 CDH5P33151 784 aaPredicted RBP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 FAM117BQ6P1L5 589 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 STKLD1Q8NE28 680 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 PCDH19Q8TAB3 1148 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 PRCCQ92733 491 aaPredicted RBP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 SLC12A6Q9UHW9 1150 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 RBM47A0AV96 593 aaKnown RBP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 TRIM49D1C9J1S8 452 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 TMEM63AO94886 807 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 CORO7P57737 925 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 PITX1P78337 314 aaPredicted RBP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 RNASEH2BQ5TBB1 312 aaKnown RBP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 OVOS1Q6IE37 1185 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 SAPCD2Q86UD0 394 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 SLC35B2Q8TB61 432 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 IVDP26440 423 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 KLRC2P26717 231 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 TKTP29401 623 aaKnown RBP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 LHX1P48742 406 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 ATN1P54259 1190 aaPredicted RBP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 KBTBD12Q3ZCT8 623 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 SPATA21Q7Z572 469 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 NIPA2Q8N8Q9 360 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 TLCD1Q96CP7 247 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 PAAF1Q9BRP4 392 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 SMYD2Q9NRG4 433 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 DERAQ9Y315 318 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 SNX10Q9Y5X0 201 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 RGPD3A6NKT7 1758 aaPredicted RBP12.6□□□□□ -0.39
CLDN4-203ENST00000435050 RGPD4Q7Z3J3 1758 aa12.6□□□□□ -0.39
CLDN4-203ENST00000435050 CFAP69A5D8W1 941 aa12.59□□□□□ -0.39
CLDN4-203ENST00000435050 CLGNO14967 610 aa12.59□□□□□ -0.39
CLDN4-203ENST00000435050 HDAC4P56524 1084 aa12.59□□□□□ -0.39
CLDN4-203ENST00000435050 INHBEP58166 350 aa12.59□□□□□ -0.39
CLDN4-203ENST00000435050 MXRA7P84157 204 aa12.59□□□□□ -0.39
CLDN4-203ENST00000435050 SEPT6Q14141 434 aa12.59□□□□□ -0.39
CLDN4-203ENST00000435050 HIC1Q14526 733 aa12.59□□□□□ -0.39
CLDN4-203ENST00000435050 NOMO1Q15155 1222 aa12.59□□□□□ -0.39
CLDN4-203ENST00000435050 OLFML1Q6UWY5 402 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms