RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 NEMP1O14524 444 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 TP73O15350 636 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 PSTPIP1O43586 416 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 KRT38O76015 456 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 KLHL2O95198 593 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 GCAP28676 217 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 GNA15P30679 374 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 ACOT2P49753 483 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 NUDT2P50583 147 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 VCPP55072 806 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 PSMC1P62191 440 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 OTUD4Q01804 1114 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 NRF1Q16656 503 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 FNBP1LQ5T0N5 605 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 ANKRD22Q5VYY1 191 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 AAGABQ6PD74 315 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 ANKS1BQ7Z6G8 1248 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 RDM1Q8NG50 284 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 DDI1Q8WTU0 396 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 JADE3Q92613 823 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 SEMA4DQ92854 862 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 SYT11Q9BT88 431 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 TRPV6Q9H1D0 765 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 ACSS3Q9H6R3 686 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 XAB2Q9HCS7 855 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 SELENONQ9NZV5 590 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 BCAP29Q9UHQ4 241 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 AKT3Q9Y243 479 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 GMEB1Q9Y692 573 aa7.67□□□□□ -1.18
SYNPO2-203ENST00000434046 E9PBE3 544 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PDLIM1O00151 329 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 DCXO43602 365 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 KLHL41O60662 606 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 LYPLA1O75608 230 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 MAP3K6O95382 1288 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 TFPTP0C1Z6 253 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PSMC3P17980 439 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PTPRAP18433 802 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 NPTX2P47972 431 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PRKD1Q15139 912 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SPDYAQ5MJ70 313 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 C16orf46Q6P387 395 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 NIPA1Q7RTP0 329 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 TRIM50Q86XT4 487 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 KCTD6Q8NC69 237 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 ZFP28Q8NHY6 868 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 DEPDC1BQ8WUY9 529 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 USP13Q92995 863 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 CMTM5Q96DZ9 223 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 FAM167AQ96KS9 214 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SERPINI1Q99574 410 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 ADPGKQ9BRR6 497 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 DDX43Q9NXZ2 648 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 RBAKQ9NYW8 714 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 IP6K2Q9UHH9 426 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 TBX20Q9UMR3 447 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 ZNF510Q9Y2H8 683 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SCN7AQ01118 1682 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 STAM2O75886 525 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 MTA2O94776 668 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 DDNO94850 711 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 DSG3P32926 999 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SERPINB5P36952 375 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 GPX6P59796 221 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 EIF3EP60228 445 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 YWHAEP62258 255 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 ART3Q13508 389 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 TTC39BQ5VTQ0 682 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SPOCD1Q6ZMY3 1216 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 CLVS1Q8IUQ0 354 aaPredicted RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 ALLCQ8N6M5 410 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 CHST13Q8NET6 341 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SHKBP1Q8TBC3 707 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SEPT1Q8WYJ6 367 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SHC3Q92529 594 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PCDH9Q9HC56 1237 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 TIMMDC1Q9NPL8 285 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 RAB6BQ9NRW1 208 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 ZC3H7BQ9UGR2 993 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 IGLV3-22A0A075B6J6 115 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PLA2G6O60733 806 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 CDK4P11802 303 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PSMA2P25787 234 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 MAPK10P53779 464 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PKNOX1P55347 436 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SOX10P56693 466 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 EMC2Q15006 297 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 HADHQ16836 314 aaKnown RBP7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 MYLK3Q32MK0 819 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 SPOPLQ6IQ16 392 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 KLHL35Q6PF15 583 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 ADGRD1Q6QNK2 874 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 NANOGNBQ7Z5D8 188 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 TTC13Q8NBP0 860 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 FEZF2Q8TBJ5 459 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 AZIN2Q96A70 460 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 MMP19Q99542 508 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PARVAQ9NVD7 372 aa7.66□□□□□ -1.18
SYNPO2-203ENST00000434046 PCDHB2Q9Y5E7 798 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms