RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 PCDHB3Q9Y5E6 796 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CACNB4O00305 520 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 PFDN6O15212 129 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 FOXP2O15409 715 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 KLHL41O60662 606 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ARHGEF15O94989 841 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GJB6O95452 261 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ZBED1O96006 694 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 NPR3P17342 541 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CORO1AP31146 461 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 HOXA11P31270 313 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SOX9P48436 509 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SULT1E1P49888 294 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GTF2BQ00403 316 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 FGL2Q14314 439 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ARID5BQ14865 1188 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 PSMD6Q15008 389 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SPRED2Q7Z698 418 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 LGI2Q8N0V4 545 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF579Q8NAF0 562 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 PKNOX2Q96KN3 472 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CNOT6LQ96LI5 555 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SLC2A11Q9BYW1 496 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CATSPERBQ9H7T0 1116 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SPHK2Q9NRA0 654 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ANO10Q9NW15 660 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 MMP17Q9ULZ9 603 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 TAF6LQ9Y6J9 622 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GOLGA8SH3BPF8 625 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 IGSF6O95976 241 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CCR1P32246 355 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GJA4P35212 333 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GJC1P36383 396 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 EIF2DP41214 584 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ZBTB16Q05516 673 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SLC10A6Q3KNW5 377 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 USP53Q70EK8 1073 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SYT13Q7L8C5 426 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 MAP7D3Q8IWC1 876 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ARL14Q8N4G2 192 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 DCLK2Q8N568 766 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 CLIC6Q96NY7 704 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 TRIM9Q9C026 710 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 LHX6Q9UPM6 363 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 A0A0B4J269 797 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 EDDM13A0A1B0GTR0 161 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GFRA2O00451 464 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 MLLT6P55198 1093 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 MYL6P60660 151 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SEMG2Q02383 582 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 C19orf57Q0VDD7 668 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 NNTQ13423 1086 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 C6orf132Q5T0Z8 1188 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SH3PXD2AQ5TCZ1 1133 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 WDR48Q8TAF3 677 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 GABPB2Q8TAK5 448 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 PDCD6IPQ8WUM4 868 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 TCEAL4Q96EI5 215 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 DHTKD1Q96HY7 919 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 EPSTI1Q96J88 318 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 SMG9Q9H0W8 520 aaKnown RBP4.79□□□□□ -1.64
UBE4A-202ENST00000431736 ELOVL2Q9NXB9 296 aa4.79□□□□□ -1.64
UBE4A-202ENST00000431736 BIN1O00499 593 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TNFRSF10BO14763 440 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SEMA4FO95754 770 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SFTPCP11686 197 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TYRP14679 529 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 BRD2P25440 801 aaKnown RBP4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TNFSF9P41273 254 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 NDST1P52848 882 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 EXOC3L4Q17RC7 722 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TMPRSS6Q8IU80 811 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 IGSF22Q8N9C0 903 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TRIM11Q96F44 468 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 CTAGE1Q96RT6 745 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 GAREM1Q9H706 876 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 FBXL12Q9NXK8 326 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SPASTQ9UBP0 616 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 A0A1B0GVL5 298 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 RGS7P49802 495 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SLC5A3P53794 718 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 DEUP1Q05D60 604 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 FUT2Q10981 343 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 CCDC6Q16204 474 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 NAPEPLDQ6IQ20 393 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 TRAF7Q6Q0C0 670 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 NRSN1Q8IZ57 195 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SERAC1Q96JX3 654 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 SPATA17Q96L03 361 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 MMTAG2Q9BU76 263 aaKnown RBP4.78□□□□□ -1.64
UBE4A-202ENST00000431736 EFHD1Q9BUP0 239 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 DUSP23Q9BVJ7 150 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 AGXT2Q9BYV1 514 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 CLIC4Q9Y696 253 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 MYH7P12883 1935 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 IRAK2O43187 625 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 MBD3O95983 291 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 ZNF806P0C7X5 589 aa4.78□□□□□ -1.64
UBE4A-202ENST00000431736 PABPC1P11940 636 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms