RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 TFDP3Q5H9I0 405 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 MMGT1Q8N4V1 131 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 BADQ92934 168 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 SMARCD1Q96GM5 515 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 RBM41Q96IZ5 413 aaKnown RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 PAIP2Q9BPZ3 127 aaKnown RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 MED4Q9NPJ6 270 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 RGS18Q9NS28 235 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 GOLGA6L10A6NI86 522 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 CCDC85CA6NKD9 419 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 C2CD4BA6NLJ0 364 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 KDELR1P24390 212 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 ELF1P32519 619 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 ITGA8P53708 1063 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 KYNUQ16719 465 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 IZUMO3Q5VZ72 239 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 OLFML1Q6UWY5 402 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 UNC93AQ86WB7 457 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 CIR1Q86X95 450 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 FBXO32Q969P5 355 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 TKTL2Q9H0I9 626 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 RAB17Q9H0T7 212 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 PPANQ9NQ55 473 aaKnown RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 CXXC1Q9P0U4 656 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-205ENST00000431183 RAB21Q9UL25 225 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 PHF24Q9UPV7 400 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 FAM169AQ9Y6X4 670 aa11.74□□□□□ -0.53
SMPD4-205ENST00000431183 A0A1W2PQH9 124 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 APRTP07741 180 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 MYOGP15173 224 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 PRLRP16471 622 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 HNRNPH1P31943 449 aaKnown RBP11.73□□□□□ -0.53
SMPD4-205ENST00000431183 ZNF143P52747 638 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-205ENST00000431183 MAP7D3Q8IWC1 876 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 TOP6BLQ8N6T0 577 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 ERP44Q9BS26 406 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 DDX23Q9BUQ8 820 aaKnown RBP11.73□□□□□ -0.53
SMPD4-205ENST00000431183 COLEC11Q9BWP8 271 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 LHX5Q9H2C1 402 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 WDCPQ9H6R7 721 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 PIGVQ9NUD9 493 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 TMEM161AQ9NX61 479 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 WDR35Q9P2L0 1181 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 PLAAQ9Y263 795 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 LTFP02788 710 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 HDAC4P56524 1084 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 USP46P62068 366 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 MRPS5P82675 430 aaKnown RBP11.73□□□□□ -0.53
SMPD4-205ENST00000431183 SPARCL1Q14515 664 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 GPNMBQ14956 572 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 INTS6LQ5JSJ4 861 aaKnown RBP11.73□□□□□ -0.53
SMPD4-205ENST00000431183 RSPO2Q6UXX9 243 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-205ENST00000431183 ZMIZ2Q8NF64 920 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 SEMA4AQ9H3S1 761 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 DMAP1Q9NPF5 467 aaPredicted RBP11.73□□□□□ -0.53
SMPD4-205ENST00000431183 STAP1Q9ULZ2 295 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 DERAQ9Y315 318 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 CCDC188H7C350 402 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 AVILO75366 819 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 TRUB2O95900 331 aaKnown RBP11.73□□□□□ -0.53
SMPD4-205ENST00000431183 GNRH1P01148 92 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 SNX16P57768 344 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 RNF19BQ6ZMZ0 732 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 UNC45BQ8IWX7 931 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 RCOR2Q8IZ40 523 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 CFAP52Q8N1V2 620 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 SELENOSQ9BQE4 189 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 RNF14Q9UBS8 474 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 CNTN6Q9UQ52 1028 aa11.73□□□□□ -0.53
SMPD4-205ENST00000431183 E2F8A0AVK6 867 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 FAM72CH0Y354 149 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 PER2O15055 1255 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 TSPAN3O60637 253 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 GALTP07902 379 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 CRADDP78560 199 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 PLD1Q13393 1074 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 OLIG2Q13516 323 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 PCBP1Q15365 356 aaKnown RBP eCLIP11.72□□□□□ -0.539e-6■■□□□ 13.3
SMPD4-205ENST00000431183 FAM72AQ5TYM5 149 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 FAM72DQ6L9T8 149 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 FAM72BQ86X60 149 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 FAM76AQ8TAV0 307 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 BCAS4Q8TDM0 211 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 BCL7CQ8WUZ0 217 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-205ENST00000431183 VCPIP1Q96JH7 1222 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 SAYSD1Q9NPB0 183 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 PAK6Q9NQU5 681 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-205ENST00000431183 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 GMIPQ9P107 970 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 MTRF1LQ9UGC7 380 aaKnown RBP11.72□□□□□ -0.53
SMPD4-205ENST00000431183 KIAA1257Q9ULG3 409 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 VANGL2Q9ULK5 521 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 TRIM43BA6NCK2 446 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 BTNL10A8MVZ5 291 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 RBL1P28749 1068 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 CHRNA3P32297 505 aa11.72□□□□□ -0.53
SMPD4-205ENST00000431183 CHKAP35790 457 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms