RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 HP1BP3Q5SSJ5 553 aaPredicted RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 FAM171BQ6P995 826 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 DARS2Q6PI48 645 aaKnown RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 BBOF1Q8ND07 529 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 CCHCR1Q8TD31 782 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 EPS8L3Q8TE67 593 aaKnown RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 SUSD3Q96L08 255 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 TPX2Q9ULW0 747 aaKnown RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 NOVA2Q9UNW9 492 aaKnown RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 NLRC5Q86WI3 1866 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 PTPRDP23468 1912 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 ERICH4A6NGS2 130 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 HMGB1P1B2RPK0 211 aaPredicted RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 H7C0C1 242 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 PQBP1O60828 265 aaKnown RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 CAPN2P17655 700 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 NOS2P35228 1153 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 RPL22P35268 128 aaKnown RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 ATP5OP48047 213 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 EIF3BP55884 814 aaKnown RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 FAM189BP81408 668 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 ROR1Q01973 937 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 GAD2Q05329 585 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 DPYSL2Q16555 572 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 STRADAQ7RTN6 431 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 C9orf72Q96LT7 481 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 FRMD8P1Q9BZ68 369 aaPredicted RBP17.35■□□□□ 0.37
USHBP1-203ENST00000431146 POPDC2Q9HBU9 364 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 MFHAS1Q9Y4C4 1052 aa17.35■□□□□ 0.37
USHBP1-203ENST00000431146 CAPN9O14815 690 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 INPPL1O15357 1258 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 NR1D1P20393 614 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 CTCFP49711 727 aaPredicted RBP17.34■□□□□ 0.37
USHBP1-203ENST00000431146 ATN1P54259 1190 aaPredicted RBP17.34■□□□□ 0.37
USHBP1-203ENST00000431146 PRMT2P55345 433 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 DSC1Q08554 894 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 TCTN1Q2MV58 587 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 RAB41Q5JT25 222 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 SYCP2LQ5T4T6 812 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 RNASEH2BQ5TBB1 312 aaKnown RBP17.34■□□□□ 0.37
USHBP1-203ENST00000431146 TRMT10CQ7L0Y3 403 aaKnown RBP17.34■□□□□ 0.37
USHBP1-203ENST00000431146 SLC7A14Q8TBB6 771 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 EDEM1Q92611 657 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 SLC2A13Q96QE2 648 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 RBM15Q96T37 977 aaKnown RBP eCLIP17.34■□□□□ 0.37
USHBP1-203ENST00000431146 NPY6RQ99463 290 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 PKMYT1Q99640 499 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 ZNF670Q9BS34 389 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 PIGVQ9NUD9 493 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 PSD3Q9NYI0 1048 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 NINJ2Q9NZG7 142 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 HCSTQ9UBK5 93 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 DSEQ9UL01 958 aa17.34■□□□□ 0.37
USHBP1-203ENST00000431146 LAMA2P24043 3122 aaKnown RBP17.34■□□□□ 0.37
USHBP1-203ENST00000431146 DNM1LO00429 736 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 GOT1P17174 413 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 YWHAHQ04917 246 aaPredicted RBP17.33■□□□□ 0.37
USHBP1-203ENST00000431146 MTM1Q13496 603 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 ANKRD22Q5VYY1 191 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 SLC9A4Q6AI14 798 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 COLGALT2Q8IYK4 626 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 ZCCHC9Q8N567 271 aaKnown RBP17.33■□□□□ 0.37
USHBP1-203ENST00000431146 URGCPQ8TCY9 931 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 NT5C3BQ969T7 300 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 NCAPGQ9BPX3 1015 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 NRDE2Q9H7Z3 1164 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 ETNK2Q9NVF9 386 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 CWC15Q9P013 229 aaKnown RBP17.33■□□□□ 0.37
USHBP1-203ENST00000431146 FZD10Q9ULW2 581 aa17.33■□□□□ 0.37
USHBP1-203ENST00000431146 BANF1O75531 89 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 ZBED1O96006 694 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 NCAM1P13591 858 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 GBE1Q04446 702 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 IFRD2Q12894 506 aaPredicted RBP17.33■□□□□ 0.36
USHBP1-203ENST00000431146 FASTKD3Q14CZ7 662 aaKnown RBP17.33■□□□□ 0.36
USHBP1-203ENST00000431146 THEM5Q8N1Q8 247 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 NETO2Q8NC67 525 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 SCLYQ96I15 445 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 CSPG4P5Q96PW8 444 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 CSNK1G1Q9HCP0 422 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 STAP1Q9ULZ2 295 aa17.33■□□□□ 0.36
USHBP1-203ENST00000431146 TCRBV7S3A2A0A539 114 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 ENPP3O14638 875 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 FBXO21O94952 628 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 TTC4O95801 387 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 AMPD1P23109 780 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 MAGOHP61326 146 aaKnown RBP17.32■□□□□ 0.36
USHBP1-203ENST00000431146 DEUP1Q05D60 604 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 SLC10A2Q12908 348 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-203ENST00000431146 LONRF1Q17RB8 773 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 BHLHA9Q7RTU4 235 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 SCAMP5Q8TAC9 235 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 CPT1BQ92523 772 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 FAF2Q96CS3 445 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 FAM193BQ96PV7 902 aaPredicted RBP17.32■□□□□ 0.36
USHBP1-203ENST00000431146 FTHL17Q9BXU8 183 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 SAYSD1Q9NPB0 183 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 CNGB3Q9NQW8 809 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 SAGE1Q9NXZ1 904 aa17.32■□□□□ 0.36
USHBP1-203ENST00000431146 VWA8A3KMH1 1905 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms