RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 EPM2AIP1Q7L775 607 aaPredicted RBP23.34■■□□□ 1.33
PTPRA-207ENST00000431048 HNRNPLLQ8WVV9 542 aaKnown RBP23.34■■□□□ 1.33
PTPRA-207ENST00000431048 CCDC127Q96BQ5 260 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 LRRC27Q9C0I9 530 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 GZF1Q9H116 711 aaPredicted RBP23.34■■□□□ 1.33
PTPRA-207ENST00000431048 PRDM16Q9HAZ2 1276 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 CSNK1G1Q9HCP0 422 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 CYLDQ9NQC7 956 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 AGPAT3Q9NRZ7 376 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 LSM7Q9UK45 103 aaKnown RBP23.34■■□□□ 1.33
PTPRA-207ENST00000431048 STON1Q9Y6Q2 735 aa23.34■■□□□ 1.33
PTPRA-207ENST00000431048 WASH3PC4AMC7 463 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 AP1G2O75843 785 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 CER1O95813 267 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 TBX18O95935 607 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 NCAM1P13591 858 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 OXTRP30559 389 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 ATP5C1P36542 298 aaKnown RBP23.33■■□□□ 1.33
PTPRA-207ENST00000431048 CDH8P55286 799 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 GOLGA8FQ08AF8 430 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 GOLGA8DPQ0D2H9 430 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 ENPP2Q13822 863 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 TPGS1Q6ZTW0 290 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 FUKQ8N0W3 1084 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 XXYLT1Q8NBI6 393 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 ZMIZ2Q8NF64 920 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 SETD7Q8WTS6 366 aaKnown RBP23.33■■□□□ 1.33
PTPRA-207ENST00000431048 CDC6Q99741 560 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 SMOQ99835 787 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 SLC27A6Q9Y2P4 619 aa23.33■■□□□ 1.33
PTPRA-207ENST00000431048 URB1O60287 2271 aaKnown RBP23.33■■□□□ 1.32
PTPRA-207ENST00000431048 METTL12A8MUP2 240 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 MEI4A8MW99 385 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 MATKP42679 507 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 STARD3Q14849 445 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 FUT11Q495W5 492 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 KLHDC10Q6PID8 442 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 HPS3Q969F9 1004 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 ERLEC1Q96DZ1 483 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 BBC3Q96PG8 261 aaPredicted RBP23.32■■□□□ 1.32
PTPRA-207ENST00000431048 GPR174Q9BXC1 333 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 TRIM9Q9C026 710 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 TNMDQ9H2S6 317 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 GAREM1Q9H706 876 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 SMYD3Q9H7B4 428 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 TM7SF3Q9NS93 570 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 TOR4AQ9NXH8 423 aa23.32■■□□□ 1.32
PTPRA-207ENST00000431048 SETXQ7Z333 2677 aaKnown RBP23.31■■□□□ 1.32
PTPRA-207ENST00000431048 PTPRBP23467 1997 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 BCAT2O15382 392 aaPredicted RBP23.31■■□□□ 1.32
PTPRA-207ENST00000431048 CILPO75339 1184 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 IGLV3-19P01714 112 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 ACO1P21399 889 aaKnown RBP23.31■■□□□ 1.32
PTPRA-207ENST00000431048 BNC1Q01954 994 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 C8orf34Q49A92 452 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 Q6ZNB5 142 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 CRYBG2Q8N1P7 616 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 ZCCHC9Q8N567 271 aaKnown RBP23.31■■□□□ 1.32
PTPRA-207ENST00000431048 C1orf216Q8TAB5 229 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 MKRN2Q9H000 416 aaKnown RBP23.31■■□□□ 1.32
PTPRA-207ENST00000431048 IL21RQ9HBE5 538 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 KRT82Q9NSB4 513 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 KBTBD4Q9NVX7 518 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 THAP10Q9P2Z0 257 aaPredicted RBP23.31■■□□□ 1.32
PTPRA-207ENST00000431048 SCML2Q9UQR0 700 aa23.31■■□□□ 1.32
PTPRA-207ENST00000431048 KCNJ18B7U540 433 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 BEST1O76090 585 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 PLA2G4AP47712 749 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 E2F5Q15329 346 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 BMT2Q1RMZ1 405 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 HLA-BQ31612 363 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 DCAF12L1Q5VU92 463 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 CNNM4Q6P4Q7 775 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 PCED1AQ9H1Q7 454 aa23.3■■□□□ 1.32
PTPRA-207ENST00000431048 CLIC2O15247 247 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 FLRT2O43155 660 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 PHACTR2O75167 634 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 TPMTP51580 245 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 CYP2J2P51589 502 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 AP3M2P53677 418 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 SLC39A14Q15043 492 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 ZNF667Q5HYK9 610 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 SCUBE3Q8IX30 993 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 C12orf56Q8IXR9 622 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 GALNT15Q8N3T1 639 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 ZNF276Q8N554 614 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 SPRYD3Q8NCJ5 442 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 LRIG1Q96JA1 1093 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 NUP58Q9BVL2 599 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 HELZ2Q9BYK8 2649 aaKnown RBP23.29■■□□□ 1.32
PTPRA-207ENST00000431048 MIR1-1HGQ9H1L0 117 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 OSER1Q9NX31 292 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 CGNQ9P2M7 1197 aaKnown RBP23.29■■□□□ 1.32
PTPRA-207ENST00000431048 FNDC3AQ9Y2H6 1198 aaKnown RBP23.29■■□□□ 1.32
PTPRA-207ENST00000431048 UBE4BO95155 1302 aa23.29■■□□□ 1.32
PTPRA-207ENST00000431048 ASXL3Q9C0F0 2248 aa23.28■■□□□ 1.32
PTPRA-207ENST00000431048 VPS37CA5D8V6 355 aaPredicted RBP23.28■■□□□ 1.32
PTPRA-207ENST00000431048 PENKP01210 267 aaPredicted RBP23.28■■□□□ 1.32
PTPRA-207ENST00000431048 ATXN1LP0C7T5 689 aaKnown RBP23.28■■□□□ 1.32
PTPRA-207ENST00000431048 PDCP20941 246 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms