RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 KRT15P19012 456 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TGM1P22735 817 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 ACAT1P24752 427 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 PTGS2P35354 604 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TNNI2P48788 182 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 AMPD3Q01432 767 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TSPY1Q01534 308 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 GBE1Q04446 702 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 KDSRQ06136 332 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRKD1Q15139 912 aaPredicted RBP9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 ALX1Q15699 326 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 ISLR2Q6UXK2 745 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CHSY1Q86X52 802 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 UBL4BQ8N7F7 174 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 C4orf32Q8N8J7 132 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 ALG3Q92685 438 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 SHISA4Q96DD7 197 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CNDP2Q96KP4 475 aaKnown RBP9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 CCDC106Q9BWC9 280 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 LRRC19Q9H756 370 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 SYTL2Q9HCH5 934 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 PCDH12Q9NPG4 1184 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 TCF7L2Q9NQB0 619 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 C8orf4Q9NR00 106 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 PNPLA3Q9NST1 481 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 POMPQ9Y244 141 aa9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 SF3B1O75533 1304 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDC42BPA-206ENST00000429440 EXOC1LA0A1B0GW35 172 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 A0A1W2PPW3 197 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 DCAF8L1A6NGE4 600 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 WTIPA6NIX2 430 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 A8MU76 341 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 TAF4O00268 1085 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 TMEM253P0C7T8 217 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 FCER1AP12319 257 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 AOC1P19801 751 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 GCAP28676 217 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CBX5P45973 191 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC26A2P50443 739 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 BNIP3Q12983 259 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF211Q13398 564 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ADGRE1Q14246 886 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF846Q147U1 533 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CLEC16AQ2KHT3 1053 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC10A5Q5PT55 438 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 C6orf52Q5T4I8 152 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZFP1Q6P2D0 407 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 LINC00299Q6ZSB3 139 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 PRUNE1Q86TP1 453 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 BRSK2Q8IWQ3 736 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ASCC1Q8N9N2 400 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ANKRD53Q8N9V6 530 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ERLEC1Q96DZ1 483 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CFAP36Q96G28 342 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 RMND5BQ96G75 393 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CDK5RAP1Q96SZ6 601 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC29A1Q99808 456 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 MKNK1Q9BUB5 465 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CNNM2Q9H8M5 875 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 RNF11Q9Y3C5 154 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZNF831Q5JPB2 1677 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 COL1A1P02452 1464 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CACNA1SQ13698 1873 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 GSG1L2A8MUP6 293 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 EVPLLA8MZ36 301 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SHOXO15266 292 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 EGFRP00533 1210 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 HOXB1P14653 301 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 IVDP26440 423 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 GALCP54803 685 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 HADHBP55084 474 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 MARSP56192 900 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ASIC1P78348 528 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 GRSF1Q12849 480 aaKnown RBP eCLIP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 PKN2Q16513 984 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ABCB5Q2M3G0 1257 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ANKS1BQ7Z6G8 1248 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ZDHHC14Q8IZN3 488 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CCDC33Q8N5R6 958 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 Q8N9G6 341 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 FANCBQ8NB91 859 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC35G2Q8TBE7 412 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CHAC2Q8WUX2 184 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ANKRD49Q8WVL7 239 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 ALKBH8Q96BT7 664 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SNX18Q96RF0 628 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 RMDN3Q96TC7 470 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 TSG101Q99816 390 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CDCA7Q9BWT1 371 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 WWP1Q9H0M0 922 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 TRIT1Q9H3H1 467 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SP140LQ9H930 580 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 EHMT1Q9H9B1 1298 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CXorf21Q9HAI6 301 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SCPEP1Q9HB40 452 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 WDR6Q9NNW5 1121 aaKnown RBP9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 DIABLOQ9NR28 239 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 SLC24A2Q9UI40 661 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 CDC14AQ9UNH5 594 aa9.16□□□□□ -0.94
CDC42BPA-206ENST00000429440 RWDD3Q9Y3V2 267 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms