RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ATF7IP2Q5U623 682 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 UNC5AQ6ZN44 842 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 PTAR1Q7Z6K3 402 aaPredicted RBP12.93□□□□□ -0.34
CDH3-202ENST00000429102 MICALL2Q8IY33 904 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 ARHGAP24Q8N264 748 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 LGMNQ99538 433 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 AKT3Q9Y243 479 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 TAF1LQ8IZX4 1826 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 OGTO15294 1046 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 DCXO43602 365 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 ERVK-10P10266 1014 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 RARBP10826 455 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 SOX11P35716 441 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 NDST1P52848 882 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 MRPS5P82675 430 aaKnown RBP12.93□□□□□ -0.34
CDH3-202ENST00000429102 AP1B1Q10567 949 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 MAP1SQ66K74 1059 aaPredicted RBP12.93□□□□□ -0.34
CDH3-202ENST00000429102 FAM183BPQ6ZVS7 135 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 HPS6Q86YV9 775 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 ZNF280CQ8ND82 737 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 OXCT2Q9BYC2 517 aaPredicted RBP12.93□□□□□ -0.34
CDH3-202ENST00000429102 ASNSD1Q9NWL6 643 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 UBP1Q9NZI7 540 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 BTBD7Q9P203 1132 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 PLA2G4CQ9UP65 541 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 HES2Q9Y543 173 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 SNX9Q9Y5X1 595 aa12.93□□□□□ -0.34
CDH3-202ENST00000429102 LACTBL1A8MY62 500 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 H0YCG3 227 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 NPM3O75607 178 aaKnown RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 WFS1O76024 890 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 LMNAP02545 664 aaKnown RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 SERPINB5P36952 375 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 ASPAP45381 313 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 ITGA9Q13797 1035 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 LGSNQ5TDP6 509 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 JADE1Q6IE81 842 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 SDCCAG8Q86SQ7 713 aaPredicted RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 FAM131BQ86XD5 332 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 RNF217Q8TC41 542 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 SKA1Q96BD8 255 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 TEX13BQ9BXU2 312 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 KLC2Q9H0B6 622 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 TSPAN16Q9UKR8 245 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 NELFEP18615 380 aaKnown RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 HSF5Q4G112 596 aaPredicted RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 FOXB2Q5VYV0 432 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 ATG16L1Q676U5 607 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 TRNP1Q6NT89 227 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 DEFB107AQ8IZN7 70 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 GALNT4Q8N4A0 578 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 USP13Q92995 863 aaPredicted RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 GCNAQ96QF7 691 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 PDLIM7Q9NR12 457 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 CLIC5Q9NZA1 410 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 ZNF214Q9UL59 606 aaPredicted RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 STRIP2Q9ULQ0 834 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 KCNK1O00180 336 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 ATP9BO43861 1147 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 ACADSP16219 412 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 GPD1P21695 349 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 EIF4BP23588 611 aaKnown RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 GLRBP48167 497 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 HIC1Q14526 733 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 STYK1Q6J9G0 422 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 GADL1Q6ZQY3 521 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 SPATA6LQ8N4H0 392 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 PLD5Q8N7P1 536 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 C1orf127Q8N9H9 656 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 OR6B3Q8NGW1 331 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 PPP4R1Q8TF05 950 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 MZB1Q8WU39 189 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 WWP1Q9H0M0 922 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 DHX33Q9H6R0 707 aaKnown RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 CAB39LQ9H9S4 337 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 XAB2Q9HCS7 855 aaKnown RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 APOBEC2Q9Y235 224 aaKnown RBP12.92□□□□□ -0.34
CDH3-202ENST00000429102 PLLPQ9Y342 182 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 PSAT1Q9Y617 370 aa12.92□□□□□ -0.34
CDH3-202ENST00000429102 APOL1O14791 398 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 KRT38O76015 456 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 NPTXRO95502 500 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 TYK2P29597 1187 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 ETV4P43268 484 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 CCR10P46092 362 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 AP2B1P63010 937 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 CCDC142Q17RM4 750 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 EFCAB12Q6NXP0 572 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 RELL1Q8IUW5 271 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 STKLD1Q8NE28 680 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 ALKBH8Q96BT7 664 aaKnown RBP12.91□□□□□ -0.34
CDH3-202ENST00000429102 CXCL16Q9H2A7 254 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 GPR25O00155 361 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 OR6B1O95007 311 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 DLG2Q15700 870 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 ANGEL2Q5VTE6 544 aaKnown RBP12.91□□□□□ -0.34
CDH3-202ENST00000429102 FAM219BQ5XKK7 198 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 DPY19L2Q6NUT2 758 aa12.91□□□□□ -0.34
CDH3-202ENST00000429102 TMPRSS6Q8IU80 811 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms