RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 SNAP47Q5SQN1 464 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 C11orf57Q6ZUT1 292 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 MTSS1LQ765P7 747 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 GPR135Q8IZ08 494 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 SYT2Q8N9I0 419 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 OR8D1Q8WZ84 308 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 IER2Q9BTL4 223 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 VPS11Q9H270 941 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 RNF19AQ9NV58 838 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 CACNB4O00305 520 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 FSBPO95073 299 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 BRAFP15056 766 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 KCNA2P16389 499 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 FSHRP23945 695 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 GDI1P31150 447 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 PRCPP42785 496 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 RFX3P48380 749 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 NPY2RP49146 381 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 RBM10P98175 930 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 BST2Q10589 180 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 TOB2Q14106 344 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 CAPRIN1Q14444 709 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 USP39Q53GS9 565 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 ARHGAP24Q8N264 748 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 CCNYL1Q8N7R7 359 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 ARMC2Q8NEN0 867 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 GRIN3AQ8TCU5 1115 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 IRF7Q92985 503 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 ELAC1Q9H777 363 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 SAMSN1Q9NSI8 373 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 PSD3Q9NYI0 1048 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 LIMA1Q9UHB6 759 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 GTF2IRD1Q9UHL9 959 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 MRFAP1Q9Y605 127 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 TRIM49BA6NDI0 452 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 GNGT2O14610 69 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 KRT38O76015 456 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 TTC4O95801 387 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 CHGBP05060 677 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 EPHX1P07099 455 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 CSF2RAP15509 400 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 HOXB8P17481 243 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 FMO5P49326 533 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 PSEN1P49768 467 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 PTPN5P54829 565 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 DUSP4Q13115 394 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 BOLA3Q53S33 107 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 COBLL1Q53SF7 1204 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 TCP11X2Q5H9J9 407 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 AARS2Q5JTZ9 985 aaKnown RBP7.49□□□□□ -1.21
CNOT4-206ENST00000428680 TRIM42Q8IWZ5 723 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 STK33Q9BYT3 514 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 FLRT1Q9NZU1 646 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 FRMPD4Q14CM0 1322 aa7.49□□□□□ -1.21
CNOT4-206ENST00000428680 SPTA1P02549 2419 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 ENC1O14682 589 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 INPP4BO15327 924 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 CFLARO15519 480 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 RNF40O75150 1001 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 FTCDO95954 541 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 HMOX2P30519 316 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 FXR2P51116 673 aaKnown RBP eCLIP7.48□□□□□ -1.21
CNOT4-206ENST00000428680 GUCY2FP51841 1108 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 PLTPP55058 493 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 HPCAP84074 193 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 BCL2L1Q07817 233 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 DBN1Q16643 649 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 C16orf59Q7L2K0 433 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 WDR49Q8IV35 697 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 CCDC60Q8IWA6 550 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-206ENST00000428680 MMGT1Q8N4V1 131 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 CPA5Q8WXQ8 436 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 KRT35Q92764 455 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 FAR2Q96K12 515 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 TEX12Q9BXU0 123 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 RRN3Q9NYV6 651 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 LAMA4Q16363 1823 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 PARP14Q460N5 1801 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 PCNTO95613 3336 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 TTC36A6NLP5 189 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 PRR33A8MZF0 331 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 SMIM24O75264 130 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 ANXA9O76027 345 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 ALOX15P16050 662 aaPredicted RBP7.48□□□□□ -1.21
CNOT4-206ENST00000428680 MSH3P20585 1137 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 SERPINA4P29622 427 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 RARRES1P49788 294 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 KDSRQ06136 332 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 SEMA3FQ13275 785 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 PDCLQ13371 301 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 SMAD1Q15797 465 aaKnown RBP7.48□□□□□ -1.21
CNOT4-206ENST00000428680 WSCD1Q658N2 575 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 TFAP2DQ7Z6R9 452 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 HDAC7Q8WUI4 952 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 MRPL38Q96DV4 380 aaKnown RBP7.48□□□□□ -1.21
CNOT4-206ENST00000428680 DNAJC1Q96KC8 554 aaKnown RBP7.48□□□□□ -1.21
CNOT4-206ENST00000428680 MCEEQ96PE7 176 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 FANCEQ9HB96 536 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 APEX2Q9UBZ4 518 aa7.48□□□□□ -1.21
CNOT4-206ENST00000428680 FHOD1Q9Y613 1164 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms