RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TMEFF1Q8IYR6 380 aa16.35■□□□□ 0.21
SEC13-210ENST00000428626 FMR1NBQ8N0W7 255 aaPredicted RBP16.35■□□□□ 0.21
SEC13-210ENST00000428626 ZNF513Q8N8E2 541 aaPredicted RBP16.35■□□□□ 0.21
SEC13-210ENST00000428626 ERCC4Q92889 916 aaPredicted RBP16.35■□□□□ 0.21
SEC13-210ENST00000428626 DUSP16Q9BY84 665 aa16.35■□□□□ 0.21
SEC13-210ENST00000428626 PNPLA8Q9NP80 782 aa16.35■□□□□ 0.21
SEC13-210ENST00000428626 POLMQ9NP87 494 aaPredicted RBP16.35■□□□□ 0.21
SEC13-210ENST00000428626 TMEM74BQ9NUR3 256 aa16.35■□□□□ 0.21
SEC13-210ENST00000428626 DNAJC17Q9NVM6 304 aaKnown RBP16.35■□□□□ 0.21
SEC13-210ENST00000428626 MARK1Q9P0L2 795 aa16.35■□□□□ 0.21
SEC13-210ENST00000428626 A0A1W2PQF6 199 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CDX4O14627 284 aaPredicted RBP16.34■□□□□ 0.21
SEC13-210ENST00000428626 STC2O76061 302 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 ALDH1A2O94788 518 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 KCNK5O95279 499 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CISD3P0C7P0 127 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 TYRP14679 529 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 PMLP29590 882 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 GTF2H1P32780 548 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 PRCPP42785 496 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 MXI1P50539 228 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 IRX4P78413 519 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CBWD6Q4V339 395 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CBWD3Q5JTY5 395 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CBWD5Q5RIA9 395 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 C10orf120Q5SQS8 335 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 GRAMD4Q6IC98 578 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 KLHDC10Q6PID8 442 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 ARMCX6Q7L4S7 300 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CCDC186Q7Z3E2 898 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CYP2U1Q7Z449 544 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 DDX1Q92499 740 aaKnown RBP16.34■□□□□ 0.21
SEC13-210ENST00000428626 BHMTQ93088 406 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 BBS2Q9BXC9 721 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CISHQ9NSE2 258 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 RAB20Q9NX57 234 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 PLK2Q9NYY3 685 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 BCCIPQ9P287 314 aaKnown RBP eCLIP16.34■□□□□ 0.21
SEC13-210ENST00000428626 NAGPAQ9UK23 515 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CIZ1Q9ULV3 898 aaPredicted RBP16.34■□□□□ 0.21
SEC13-210ENST00000428626 STARD13Q9Y3M8 1113 aa16.34■□□□□ 0.21
SEC13-210ENST00000428626 CACNA1EQ15878 2313 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 TULP2O00295 520 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 GIPC1O14908 333 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 KIAA1211LQ6NV74 962 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 C11orf74Q86VG3 221 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 ZC3H3Q8IXZ2 948 aaKnown RBP16.33■□□□□ 0.2
SEC13-210ENST00000428626 FBXL13Q8NEE6 735 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 ENGASEQ8NFI3 743 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 PIGKQ92643 395 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 HEXIM2Q96MH2 286 aaKnown RBP16.33■□□□□ 0.2
SEC13-210ENST00000428626 CD93Q9NPY3 652 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 DNMT3LQ9UJW3 386 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 FRYQ5TBA9 3013 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 CEP192Q8TEP8 1941 aa16.33■□□□□ 0.2
SEC13-210ENST00000428626 TRIM49BA6NDI0 452 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 KRT37O76014 449 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 HOXB2P14652 356 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 PLA2G4AP47712 749 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 RAB41Q5JT25 222 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 BHLHA9Q7RTU4 235 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 PIGZQ86VD9 579 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 PGBD3Q8N328 593 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 ZNF276Q8N554 614 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 DEFB119Q8N690 84 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 KCNV2Q8TDN2 545 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 NDRG1Q92597 394 aaKnown RBP16.32■□□□□ 0.2
SEC13-210ENST00000428626 TMEM176AQ96HP8 235 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 ATXN2Q99700 1313 aaKnown RBP16.32■□□□□ 0.2
SEC13-210ENST00000428626 SLC6A17Q9H1V8 727 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 CALCOCO1Q9P1Z2 691 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 FBXO10Q9UK96 956 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 RAD54BQ9Y620 910 aa16.32■□□□□ 0.2
SEC13-210ENST00000428626 WASH3PC4AMC7 463 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 KHNYNO15037 678 aaKnown RBP16.31■□□□□ 0.2
SEC13-210ENST00000428626 CETN3O15182 167 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 HMBSP08397 361 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 NTSR1P30989 418 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 EFEMP1Q12805 493 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 ARHGAP17Q68EM7 881 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 PSAPL1Q6NUJ1 521 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 LPCAT2Q7L5N7 544 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 CLIC5Q9NZA1 410 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 WDR35Q9P2L0 1181 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 RASAL2Q9UJF2 1139 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 LSM7Q9UK45 103 aaKnown RBP16.31■□□□□ 0.2
SEC13-210ENST00000428626 CLEC4EQ9ULY5 219 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 COQ4Q9Y3A0 265 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 ATP6V1DQ9Y5K8 247 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 ADAMTS9Q9P2N4 1935 aa16.31■□□□□ 0.2
SEC13-210ENST00000428626 MAP3K13O43283 966 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 PENKP01210 267 aaPredicted RBP16.3■□□□□ 0.2
SEC13-210ENST00000428626 EPB41P11171 864 aaKnown RBP16.3■□□□□ 0.2
SEC13-210ENST00000428626 NDUFV2P19404 249 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 ITPKAP23677 461 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 DGKGP49619 791 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 COBLL1Q53SF7 1204 aa16.3■□□□□ 0.2
SEC13-210ENST00000428626 DCAF17Q5H9S7 520 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms